Analysis of interatomic Contacts of Structural Units in PDB entry:
7E58


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7E58 entry

There are 2 chains in PDB entry 7E58 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 8SER 583
B
 PRO 8THR 98
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 7E58. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 33Right-handed alpha
Helix 2
AA2
A
50 59Right-handed alpha
Helix 3
AA3
A
110 123Right-handed alpha
Helix 4
AA4
A
135 142Right-handed alpha
Helix 5
AA5
A
143 152Right-handed alpha
Helix 6
AA6
A
164 167Right-handed 310
Helix 7
AA7
A
168 173Right-handed alpha
Helix 8
AA8
A
195 204Right-handed alpha
Helix 9
AA9
A
211 228Right-handed alpha
Helix 10
AB1
A
247 251Right-handed 310
Helix 11
AB2
A
252 256Right-handed 310
Helix 12
AB3
A
257 275Right-handed alpha
Helix 13
AB4
A
287 304Right-handed alpha
Helix 14
AB5
A
309 341Right-handed alpha
Helix 15
AB6
A
347 369Right-handed alpha
Helix 16
AB7
A
373 375Right-handed 310
Helix 17
AB8
A
376 413Right-handed alpha
Helix 18
AB9
A
413 422Right-handed alpha
Helix 19
AC1
A
429 448Right-handed alpha
Helix 20
AC2
A
454 466Right-handed alpha
Helix 21
AC3
A
466 477Right-handed alpha
Helix 22
AC4
A
481 561Right-handed alpha
Helix 23
AC5
A
563 582Right-handed alpha
Helix 24
AC6
B
24 33Right-handed alpha
Helix 25
AC7
B
50 60Right-handed alpha
Helix 26
AC8
B
111 123Right-handed alpha
Helix 27
AC9
B
135 142Right-handed alpha
Helix 28
AD1
B
143 148Right-handed alpha
Helix 29
AD2
B
149 151Right-handed 310
Helix 30
AD3
B
164 167Right-handed 310
Helix 31
AD4
B
168 173Right-handed alpha
Helix 32
AD5
B
195 204Right-handed alpha
Helix 33
AD6
B
211 228Right-handed alpha
Helix 34
AD7
B
247 251Right-handed 310
Helix 35
AD8
B
252 256Right-handed 310
Helix 36
AD9
B
257 275Right-handed alpha
Helix 37
AE1
B
287 304Right-handed alpha
Helix 38
AE2
B
309 341Right-handed alpha
Helix 39
AE3
B
347 369Right-handed alpha
Helix 40
AE4
B
373 375Right-handed 310
Helix 41
AE5
B
376 413Right-handed alpha
Helix 42
AE6
B
413 422Right-handed alpha
Helix 43
AE7
B
429 448Right-handed alpha
Helix 44
AE8
B
454 466Right-handed alpha
Helix 45
AE9
B
466 477Right-handed alpha
Helix 46
AF1
B
481 561Right-handed alpha
Helix 47
AF2
B
563 582Right-handed alpha
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There are 6 sheets in PDB entry 7E58. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 23first strand
Strand 2
A
11 17anti-parallel
Strand 3
A
78 84anti-parallel
Strand 4
A
92 98anti-parallel
Strand 5
A
38 45parallel
Strand 6
A
125 131parallel
Strand 7
A
175 181parallel
Strand 8
A
231 236parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 189first strand
Strand 2
A
192 193anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
279 280first strand
Strand 2
A
284 285anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
20 23first strand
Strand 2
B
11 17anti-parallel
Strand 3
B
77 84anti-parallel
Strand 4
B
92 99anti-parallel
Strand 5
B
38 45parallel
Strand 6
B
125 131parallel
Strand 7
B
175 181parallel
Strand 8
B
231 236parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
188 189first strand
Strand 2
B
192 193anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
279 280first strand
Strand 2
B
284 285anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il