Analysis of interatomic Contacts of Structural Units in PDB entry:
7E5A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7E5A entry

There are 2 chains in PDB entry 7E5A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 5THR 483
B
 ILE 5GLU 484
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 7E5A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 33Right-handed alpha
Helix 2
AA2
A
50 59Right-handed alpha
Helix 3
AA3
A
109 123Right-handed alpha
Helix 4
AA4
A
135 155Right-handed alpha
Helix 5
AA5
A
169 173Right-handed 310
Helix 6
AA6
A
195 205Right-handed alpha
Helix 7
AA7
A
211 228Right-handed alpha
Helix 8
AA8
A
241 251Right-handed 310
Helix 9
AA9
A
252 256Right-handed 310
Helix 10
AB1
A
257 275Right-handed alpha
Helix 11
AB2
A
287 304Right-handed alpha
Helix 12
AB3
A
312 336Right-handed alpha
Helix 13
AB4
A
348 370Right-handed alpha
Helix 14
AB5
A
373 375Right-handed 310
Helix 15
AB6
A
376 413Right-handed alpha
Helix 16
AB7
A
413 423Right-handed alpha
Helix 17
AB8
A
433 448Right-handed alpha
Helix 18
AB9
A
454 466Right-handed alpha
Helix 19
AC1
A
468 483Right-handed alpha
Helix 20
AC2
B
24 33Right-handed alpha
Helix 21
AC3
B
50 59Right-handed alpha
Helix 22
AC4
B
109 123Right-handed alpha
Helix 23
AC5
B
135 155Right-handed alpha
Helix 24
AC6
B
168 173Right-handed 310
Helix 25
AC7
B
195 205Right-handed alpha
Helix 26
AC8
B
211 228Right-handed alpha
Helix 27
AC9
B
241 245Right-handed 310
Helix 28
AD1
B
247 251Right-handed 310
Helix 29
AD2
B
252 256Right-handed 310
Helix 30
AD3
B
257 275Right-handed alpha
Helix 31
AD4
B
287 304Right-handed alpha
Helix 32
AD5
B
312 336Right-handed alpha
Helix 33
AD6
B
347 370Right-handed alpha
Helix 34
AD7
B
373 375Right-handed 310
Helix 35
AD8
B
376 413Right-handed alpha
Helix 36
AD9
B
413 423Right-handed alpha
Helix 37
AE1
B
433 448Right-handed alpha
Helix 38
AE2
B
454 466Right-handed alpha
Helix 39
AE3
B
466 484Right-handed alpha
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There are 6 sheets in PDB entry 7E5A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 23first strand
Strand 2
A
11 17anti-parallel
Strand 3
A
78 84anti-parallel
Strand 4
A
92 98anti-parallel
Strand 5
A
38 45parallel
Strand 6
A
125 131parallel
Strand 7
A
175 181parallel
Strand 8
A
231 235parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 189first strand
Strand 2
A
192 193anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
279 280first strand
Strand 2
A
284 285anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
20 23first strand
Strand 2
B
11 17anti-parallel
Strand 3
B
78 84anti-parallel
Strand 4
B
92 98anti-parallel
Strand 5
B
38 45parallel
Strand 6
B
125 131parallel
Strand 7
B
175 181parallel
Strand 8
B
231 235parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
188 189first strand
Strand 2
B
192 193anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
279 280first strand
Strand 2
B
284 285anti-parallel
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