Analysis of interatomic Contacts of Structural Units in PDB entry:
7E5C

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7E5C entry

There are 4 chains in PDB entry 7E5C (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 2	ASP 440
B	ASP 2	ASP 440
C	ASP 2	ASP 440
D	ASP 2	ASP 440

There are 71 helices in PDB entry 7E5C. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	26	Right-handed alpha
Helix 2	AA2	A	53	58	Right-handed alpha
Helix 3	AA3	A	100	104	Right-handed 310
Helix 4	AA4	A	111	119	Right-handed 310
Helix 5	AA5	A	132	140	Right-handed alpha
Helix 6	AA6	A	146	157	Right-handed alpha
Helix 7	AA7	A	161	188	Right-handed alpha
Helix 8	AA8	A	191	204	Right-handed alpha
Helix 9	AA9	A	206	210	Right-handed 310
Helix 10	AB1	A	220	224	Right-handed 310
Helix 11	AB2	A	266	285	Right-handed alpha
Helix 12	AB3	A	291	310	Right-handed alpha
Helix 13	AB4	A	316	323	Right-handed alpha
Helix 14	AB5	A	325	330	Right-handed alpha
Helix 15	AB6	A	387	395	Right-handed alpha
Helix 16	AB7	A	399	403	Right-handed 310
Helix 17	AB8	A	404	412	Right-handed alpha
Helix 18	AB9	A	433	437	Right-handed alpha
Helix 19	AC1	B	3	26	Right-handed alpha
Helix 20	AC2	B	53	58	Right-handed alpha
Helix 21	AC3	B	100	104	Right-handed 310
Helix 22	AC4	B	111	119	Right-handed 310
Helix 23	AC5	B	132	140	Right-handed alpha
Helix 24	AC6	B	146	157	Right-handed alpha
Helix 25	AC7	B	161	188	Right-handed alpha
Helix 26	AC8	B	191	204	Right-handed alpha
Helix 27	AC9	B	220	224	Right-handed 310
Helix 28	AD1	B	266	285	Right-handed alpha
Helix 29	AD2	B	291	310	Right-handed alpha
Helix 30	AD3	B	316	323	Right-handed alpha
Helix 31	AD4	B	325	330	Right-handed alpha
Helix 32	AD5	B	387	395	Right-handed alpha
Helix 33	AD6	B	399	403	Right-handed 310
Helix 34	AD7	B	404	412	Right-handed alpha
Helix 35	AD8	B	433	437	Right-handed alpha
Helix 36	AD9	C	3	26	Right-handed alpha
Helix 37	AE1	C	53	58	Right-handed alpha
Helix 38	AE2	C	100	104	Right-handed 310
Helix 39	AE3	C	111	119	Right-handed 310
Helix 40	AE4	C	132	140	Right-handed alpha
Helix 41	AE5	C	146	157	Right-handed alpha
Helix 42	AE6	C	161	188	Right-handed alpha
Helix 43	AE7	C	191	204	Right-handed alpha
Helix 44	AE8	C	206	210	Right-handed 310
Helix 45	AE9	C	220	224	Right-handed 310
Helix 46	AF1	C	266	285	Right-handed alpha
Helix 47	AF2	C	291	310	Right-handed alpha
Helix 48	AF3	C	316	323	Right-handed alpha
Helix 49	AF4	C	325	330	Right-handed alpha
Helix 50	AF5	C	387	396	Right-handed alpha
Helix 51	AF6	C	399	403	Right-handed 310
Helix 52	AF7	C	404	412	Right-handed alpha
Helix 53	AF8	C	433	437	Right-handed alpha
Helix 54	AF9	D	3	26	Right-handed alpha
Helix 55	AG1	D	53	58	Right-handed alpha
Helix 56	AG2	D	100	104	Right-handed 310
Helix 57	AG3	D	111	119	Right-handed 310
Helix 58	AG4	D	132	140	Right-handed alpha
Helix 59	AG5	D	146	157	Right-handed alpha
Helix 60	AG6	D	161	188	Right-handed alpha
Helix 61	AG7	D	191	204	Right-handed alpha
Helix 62	AG8	D	206	210	Right-handed 310
Helix 63	AG9	D	220	224	Right-handed 310
Helix 64	AH1	D	266	285	Right-handed alpha
Helix 65	AH2	D	291	310	Right-handed alpha
Helix 66	AH3	D	316	323	Right-handed alpha
Helix 67	AH4	D	325	330	Right-handed alpha
Helix 68	AH5	D	387	395	Right-handed alpha
Helix 69	AH6	D	399	403	Right-handed 310
Helix 70	AH7	D	404	412	Right-handed alpha
Helix 71	AH8	D	433	437	Right-handed alpha

There are 16 sheets in PDB entry 7E5C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	105	109	first strand
Strand 2	A	79	83	parallel
Strand 3	A	69	72	anti-parallel
Strand 4	A	30	34	anti-parallel
Strand 5	A	126	129	parallel
Strand 6	A	143	144	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	215	218	first strand
Strand 2	A	240	249	anti-parallel
Strand 3	A	252	261	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	376	380	first strand
Strand 2	A	421	425	anti-parallel
Strand 3	A	430	432	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	383	385	first strand
Strand 2	A	416	418	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	105	109	first strand
Strand 2	B	79	83	parallel
Strand 3	B	69	72	anti-parallel
Strand 4	B	30	34	anti-parallel
Strand 5	B	126	129	parallel
Strand 6	B	143	144	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	215	218	first strand
Strand 2	B	240	249	anti-parallel
Strand 3	B	252	261	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	376	380	first strand
Strand 2	B	421	425	anti-parallel
Strand 3	B	430	432	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	383	385	first strand
Strand 2	B	416	418	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	105	109	first strand
Strand 2	C	79	83	parallel
Strand 3	C	69	72	anti-parallel
Strand 4	C	30	34	anti-parallel
Strand 5	C	126	129	parallel
Strand 6	C	143	144	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	215	218	first strand
Strand 2	C	240	249	anti-parallel
Strand 3	C	252	261	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	376	380	first strand
Strand 2	C	421	425	anti-parallel
Strand 3	C	430	432	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	383	385	first strand
Strand 2	C	416	418	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	105	109	first strand
Strand 2	D	79	83	parallel
Strand 3	D	69	72	anti-parallel
Strand 4	D	30	34	anti-parallel
Strand 5	D	126	129	parallel
Strand 6	D	143	144	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	215	218	first strand
Strand 2	D	240	249	anti-parallel
Strand 3	D	252	261	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	376	380	first strand
Strand 2	D	421	425	anti-parallel
Strand 3	D	430	432	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	383	385	first strand
Strand 2	D	416	418	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7E5C

Analysis of interatomic Contacts of Structural Units in PDB entry:
7E5C