Analysis of interatomic Contacts of Structural Units in PDB entry:
7E5Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7E5Q entry

There are 2 chains in PDB entry 7E5Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 363
B
 GLU 2SER 363
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 7E5Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 55Right-handed alpha
Helix 2
AA2
A
91 95Right-handed alpha
Helix 3
AA3
A
105 109Right-handed 310
Helix 4
AA4
A
125 129Right-handed 310
Helix 5
AA5
A
141 157Right-handed alpha
Helix 6
AA6
A
196 204Right-handed alpha
Helix 7
AA7
A
211 215Right-handed 310
Helix 8
AA8
A
228 235Right-handed alpha
Helix 9
AA9
A
236 245Right-handed alpha
Helix 10
AB1
A
264 268Right-handed 310
Helix 11
AB2
A
272 280Right-handed alpha
Helix 12
AB3
A
314 319Right-handed alpha
Helix 13
AB4
A
319 330Right-handed alpha
Helix 14
AB5
A
331 334Right-handed 310
Helix 15
AB6
A
357 362Right-handed alpha
Helix 16
AB7
B
35 55Right-handed alpha
Helix 17
AB8
B
92 94Right-handed 310
Helix 18
AB9
B
105 109Right-handed 310
Helix 19
AC1
B
125 129Right-handed 310
Helix 20
AC2
B
141 157Right-handed alpha
Helix 21
AC3
B
196 204Right-handed alpha
Helix 22
AC4
B
211 215Right-handed 310
Helix 23
AC5
B
228 234Right-handed alpha
Helix 24
AC6
B
236 245Right-handed alpha
Helix 25
AC7
B
264 268Right-handed 310
Helix 26
AC8
B
272 279Right-handed alpha
Helix 27
AC9
B
314 319Right-handed alpha
Helix 28
AD1
B
319 330Right-handed alpha
Helix 29
AD2
B
331 334Right-handed 310
Helix 30
AD3
B
357 363Right-handed alpha
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There are 8 sheets in PDB entry 7E5Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 90first strand
Strand 2
A
133 139anti-parallel
Strand 3
A
23 31anti-parallel
Strand 4
A
160 169anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 97first strand
Strand 2
A
100 101anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
285 286first strand
Strand 2
A
302 312anti-parallel
Strand 3
A
289 295anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
285 286first strand
Strand 2
A
302 312anti-parallel
Strand 3
A
218 227anti-parallel
Strand 4
A
336 346anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
85 90first strand
Strand 2
B
133 139anti-parallel
Strand 3
B
23 31anti-parallel
Strand 4
B
160 169anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
96 97first strand
Strand 2
B
100 101anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
285 286first strand
Strand 2
B
302 312anti-parallel
Strand 3
B
289 295anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
285 286first strand
Strand 2
B
302 312anti-parallel
Strand 3
B
218 227anti-parallel
Strand 4
B
336 346anti-parallel
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