Analysis of interatomic Contacts of Structural Units in PDB entry:
7E5T

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7E5T entry

There are 8 chains in PDB entry 7E5T (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	SER 374
B	MET 1	SER 374
C	SER 2	SER 374
D	SER 2	SER 374
E	MET 1	SER 374
F	MET 1	SER 374
G	MET 1	SER 374
H	MET 1	SER 374

There are 20 helices in PDB entry 7E5T. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	70	75	Right-handed 310
Helix 2	AA2	A	117	120	Right-handed 310
Helix 3	AA3	A	215	220	Right-handed alpha
Helix 4	AA4	B	69	74	Right-handed 310
Helix 5	AA5	B	117	120	Right-handed 310
Helix 6	AA6	B	215	220	Right-handed alpha
Helix 7	AA7	C	71	75	Right-handed 310
Helix 8	AA8	C	215	220	Right-handed alpha
Helix 9	AA9	D	70	72	Right-handed 310
Helix 10	AB1	D	117	120	Right-handed 310
Helix 11	AB2	D	215	220	Right-handed alpha
Helix 12	AB3	E	70	75	Right-handed 310
Helix 13	AB4	E	215	220	Right-handed alpha
Helix 14	AB5	F	70	74	Right-handed 310
Helix 15	AB6	F	215	219	Right-handed 310
Helix 16	AB7	G	11	14	Right-handed alpha
Helix 17	AB8	G	215	220	Right-handed alpha
Helix 18	AB9	H	70	72	Right-handed 310
Helix 19	AC1	H	117	120	Right-handed 310
Helix 20	AC2	H	215	220	Right-handed alpha

There are 33 sheets in PDB entry 7E5T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	5	10	first strand
Strand 2	A	99	104	anti-parallel
Strand 3	A	110	116	anti-parallel
Strand 4	A	121	127	anti-parallel
Strand 5	A	133	140	anti-parallel
Strand 6	A	144	152	anti-parallel
Strand 7	A	170	187	anti-parallel
Strand 8	A	203	212	anti-parallel
Strand 9	A	45	54	anti-parallel
Strand 10	A	60	68	anti-parallel
Strand 11	A	77	84	anti-parallel
Strand 12	A	90	97	anti-parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	5	10	first strand
Strand 2	A	99	104	anti-parallel
Strand 3	A	110	116	anti-parallel
Strand 4	A	121	127	anti-parallel
Strand 5	A	133	140	anti-parallel
Strand 6	A	144	152	anti-parallel
Strand 7	A	170	187	anti-parallel
Strand 8	A	194	198	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	15	16	first strand
Strand 2	A	40	41	parallel

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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	222	230	first strand
Strand 2	A	233	241	anti-parallel
Strand 3	A	251	258	anti-parallel
Strand 4	A	261	269	anti-parallel
Strand 5	A	281	287	parallel
Strand 6	A	306	312	anti-parallel
Strand 7	A	320	335	anti-parallel
Strand 8	A	345	356	anti-parallel
Strand 9	A	362	372	anti-parallel
Strand 10	A	222	230	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	5	10	first strand
Strand 2	B	99	104	anti-parallel
Strand 3	B	110	116	anti-parallel
Strand 4	B	121	127	anti-parallel
Strand 5	B	133	140	anti-parallel
Strand 6	B	144	152	anti-parallel
Strand 7	B	169	187	anti-parallel
Strand 8	B	164	165	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	97	first strand
Strand 2	B	77	84	anti-parallel
Strand 3	B	60	67	anti-parallel
Strand 4	B	45	54	anti-parallel
Strand 5	B	203	212	anti-parallel
Strand 6	B	169	187	anti-parallel
Strand 7	B	194	198	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	15	16	first strand
Strand 2	B	40	41	parallel

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There are 10 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	261	266	first strand
Strand 2	B	251	258	anti-parallel
Strand 3	B	233	241	anti-parallel
Strand 4	B	222	230	anti-parallel
Strand 5	B	362	372	anti-parallel
Strand 6	B	345	356	anti-parallel
Strand 7	B	320	335	anti-parallel
Strand 8	B	306	312	anti-parallel
Strand 9	B	281	287	anti-parallel
Strand 10	B	268	269	parallel

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There are 12 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	5	10	first strand
Strand 2	C	99	104	anti-parallel
Strand 3	C	110	116	anti-parallel
Strand 4	C	121	127	anti-parallel
Strand 5	C	133	140	anti-parallel
Strand 6	C	144	152	anti-parallel
Strand 7	C	170	187	anti-parallel
Strand 8	C	203	212	anti-parallel
Strand 9	C	45	54	anti-parallel
Strand 10	C	60	68	anti-parallel
Strand 11	C	77	84	anti-parallel
Strand 12	C	90	97	anti-parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	5	10	first strand
Strand 2	C	99	104	anti-parallel
Strand 3	C	110	116	anti-parallel
Strand 4	C	121	127	anti-parallel
Strand 5	C	133	140	anti-parallel
Strand 6	C	144	152	anti-parallel
Strand 7	C	170	187	anti-parallel
Strand 8	C	194	198	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	15	16	first strand
Strand 2	C	40	41	parallel

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There are 9 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	261	266	first strand
Strand 2	C	251	258	anti-parallel
Strand 3	C	233	241	anti-parallel
Strand 4	C	222	230	anti-parallel
Strand 5	C	362	372	anti-parallel
Strand 6	C	345	356	anti-parallel
Strand 7	C	320	335	anti-parallel
Strand 8	C	306	312	anti-parallel
Strand 9	C	281	287	anti-parallel

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There are 12 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	5	10	first strand
Strand 2	D	99	104	anti-parallel
Strand 3	D	110	116	anti-parallel
Strand 4	D	121	127	anti-parallel
Strand 5	D	133	140	anti-parallel
Strand 6	D	144	152	anti-parallel
Strand 7	D	170	186	anti-parallel
Strand 8	D	203	212	anti-parallel
Strand 9	D	45	54	anti-parallel
Strand 10	D	60	68	anti-parallel
Strand 11	D	77	84	anti-parallel
Strand 12	D	90	97	anti-parallel

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There are 8 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	5	10	first strand
Strand 2	D	99	104	anti-parallel
Strand 3	D	110	116	anti-parallel
Strand 4	D	121	127	anti-parallel
Strand 5	D	133	140	anti-parallel
Strand 6	D	144	152	anti-parallel
Strand 7	D	170	186	anti-parallel
Strand 8	D	195	198	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	15	16	first strand
Strand 2	D	40	41	parallel

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There are 10 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	261	266	first strand
Strand 2	D	251	258	anti-parallel
Strand 3	D	233	241	anti-parallel
Strand 4	D	222	230	anti-parallel
Strand 5	D	362	372	anti-parallel
Strand 6	D	345	356	anti-parallel
Strand 7	D	320	335	anti-parallel
Strand 8	D	306	312	anti-parallel
Strand 9	D	281	286	anti-parallel
Strand 10	D	268	270	parallel

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There are 8 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	5	10	first strand
Strand 2	E	99	104	anti-parallel
Strand 3	E	110	116	anti-parallel
Strand 4	E	121	127	anti-parallel
Strand 5	E	133	140	anti-parallel
Strand 6	E	144	152	anti-parallel
Strand 7	E	169	188	anti-parallel
Strand 8	E	164	165	anti-parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	90	97	first strand
Strand 2	E	77	84	anti-parallel
Strand 3	E	60	68	anti-parallel
Strand 4	E	45	54	anti-parallel
Strand 5	E	203	212	anti-parallel
Strand 6	E	169	188	anti-parallel
Strand 7	E	191	198	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	15	16	first strand
Strand 2	E	40	41	parallel

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There are 10 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	222	230	first strand
Strand 2	E	233	241	anti-parallel
Strand 3	E	251	258	anti-parallel
Strand 4	E	261	269	anti-parallel
Strand 5	E	281	286	parallel
Strand 6	E	306	312	anti-parallel
Strand 7	E	320	335	anti-parallel
Strand 8	E	345	356	anti-parallel
Strand 9	E	362	372	anti-parallel
Strand 10	E	222	230	anti-parallel

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There are 12 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	5	10	first strand
Strand 2	F	99	104	anti-parallel
Strand 3	F	110	115	anti-parallel
Strand 4	F	122	127	anti-parallel
Strand 5	F	133	140	anti-parallel
Strand 6	F	144	152	anti-parallel
Strand 7	F	170	187	anti-parallel
Strand 8	F	203	212	anti-parallel
Strand 9	F	45	54	anti-parallel
Strand 10	F	60	68	anti-parallel
Strand 11	F	77	84	anti-parallel
Strand 12	F	90	97	anti-parallel

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There are 8 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	5	10	first strand
Strand 2	F	99	104	anti-parallel
Strand 3	F	110	115	anti-parallel
Strand 4	F	122	127	anti-parallel
Strand 5	F	133	140	anti-parallel
Strand 6	F	144	152	anti-parallel
Strand 7	F	170	187	anti-parallel
Strand 8	F	194	198	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	15	16	first strand
Strand 2	F	40	41	parallel

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There are 10 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	222	230	first strand
Strand 2	F	233	241	anti-parallel
Strand 3	F	251	258	anti-parallel
Strand 4	F	261	269	anti-parallel
Strand 5	F	281	287	parallel
Strand 6	F	306	312	anti-parallel
Strand 7	F	320	335	anti-parallel
Strand 8	F	345	356	anti-parallel
Strand 9	F	362	372	anti-parallel
Strand 10	F	222	230	anti-parallel

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There are 8 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	5	10	first strand
Strand 2	G	99	104	anti-parallel
Strand 3	G	110	116	anti-parallel
Strand 4	G	121	127	anti-parallel
Strand 5	G	133	140	anti-parallel
Strand 6	G	144	152	anti-parallel
Strand 7	G	169	187	anti-parallel
Strand 8	G	164	165	anti-parallel

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There are 7 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	90	97	first strand
Strand 2	G	77	84	anti-parallel
Strand 3	G	60	68	anti-parallel
Strand 4	G	45	54	anti-parallel
Strand 5	G	203	212	anti-parallel
Strand 6	G	169	187	anti-parallel
Strand 7	G	194	198	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	15	16	first strand
Strand 2	G	40	41	parallel

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There are 10 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	222	230	first strand
Strand 2	G	233	241	anti-parallel
Strand 3	G	251	258	anti-parallel
Strand 4	G	261	269	anti-parallel
Strand 5	G	281	287	parallel
Strand 6	G	306	312	anti-parallel
Strand 7	G	320	335	anti-parallel
Strand 8	G	345	356	anti-parallel
Strand 9	G	362	372	anti-parallel
Strand 10	G	222	230	anti-parallel

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There are 8 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	5	10	first strand
Strand 2	H	99	104	anti-parallel
Strand 3	H	110	116	anti-parallel
Strand 4	H	121	127	anti-parallel
Strand 5	H	133	140	anti-parallel
Strand 6	H	144	152	anti-parallel
Strand 7	H	169	186	anti-parallel
Strand 8	H	164	165	anti-parallel

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There are 7 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	90	97	first strand
Strand 2	H	77	84	anti-parallel
Strand 3	H	60	68	anti-parallel
Strand 4	H	45	54	anti-parallel
Strand 5	H	203	212	anti-parallel
Strand 6	H	169	186	anti-parallel
Strand 7	H	195	198	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	15	16	first strand
Strand 2	H	40	41	parallel

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There are 10 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	222	230	first strand
Strand 2	H	233	241	anti-parallel
Strand 3	H	251	258	anti-parallel
Strand 4	H	261	269	anti-parallel
Strand 5	H	281	287	parallel
Strand 6	H	306	312	anti-parallel
Strand 7	H	320	335	anti-parallel
Strand 8	H	345	356	anti-parallel
Strand 9	H	362	372	anti-parallel
Strand 10	H	222	230	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	276	277	first strand
Strand 2	H	315	316	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7E5T

Analysis of interatomic Contacts of Structural Units in PDB entry:
7E5T