Analysis of interatomic Contacts of Structural Units in PDB entry:
7E5W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7E5W entry

There are 3 chains in PDB entry 7E5W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2LYS 329
B
 THR 2LYS 329
C
 THR 2LYS 329
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 7E5W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 13Right-handed alpha
Helix 2
AA2
A
15 24Right-handed alpha
Helix 3
AA3
A
30 44Right-handed alpha
Helix 4
AA4
A
72 89Right-handed alpha
Helix 5
AA5
A
101 115Right-handed alpha
Helix 6
AA6
A
128 138Right-handed alpha
Helix 7
AA7
A
160 175Right-handed alpha
Helix 8
AA8
A
188 207Right-handed alpha
Helix 9
AA9
A
221 233Right-handed alpha
Helix 10
AB1
A
244 258Right-handed alpha
Helix 11
AB2
A
274 278Right-handed 310
Helix 12
AB3
A
290 307Right-handed alpha
Helix 13
AB4
B
4 13Right-handed alpha
Helix 14
AB5
B
15 25Right-handed alpha
Helix 15
AB6
B
30 45Right-handed alpha
Helix 16
AB7
B
72 89Right-handed alpha
Helix 17
AB8
B
101 115Right-handed alpha
Helix 18
AB9
B
128 138Right-handed alpha
Helix 19
AC1
B
160 175Right-handed alpha
Helix 20
AC2
B
188 206Right-handed alpha
Helix 21
AC3
B
221 231Right-handed alpha
Helix 22
AC4
B
244 258Right-handed alpha
Helix 23
AC5
B
274 279Right-handed 310
Helix 24
AC6
B
290 307Right-handed alpha
Helix 25
AC7
C
4 12Right-handed alpha
Helix 26
AC8
C
15 25Right-handed alpha
Helix 27
AC9
C
30 45Right-handed alpha
Helix 28
AD1
C
72 89Right-handed alpha
Helix 29
AD2
C
101 115Right-handed alpha
Helix 30
AD3
C
128 138Right-handed alpha
Helix 31
AD4
C
160 175Right-handed alpha
Helix 32
AD5
C
188 206Right-handed alpha
Helix 33
AD6
C
221 232Right-handed alpha
Helix 34
AD7
C
244 258Right-handed alpha
Helix 35
AD8
C
274 279Right-handed 310
Helix 36
AD9
C
290 307Right-handed alpha
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There are 10 sheets in PDB entry 7E5W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 97first strand
Strand 2
A
62 67parallel
Strand 3
A
119 123parallel
Strand 4
A
142 145parallel
Strand 5
A
155 158parallel
Strand 6
A
315 317parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 127first strand
Strand 2
A
148 149parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 215first strand
Strand 2
A
179 184parallel
Strand 3
A
239 242parallel
Strand 4
A
267 269parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
286 288first strand
Strand 2
A
321 323anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 97first strand
Strand 2
B
62 67parallel
Strand 3
B
119 123parallel
Strand 4
B
142 145parallel
Strand 5
B
155 159parallel
Strand 6
B
315 318parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
126 127first strand
Strand 2
B
148 149parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
209 215first strand
Strand 2
B
179 184parallel
Strand 3
B
239 242parallel
Strand 4
B
267 270parallel
Strand 5
B
285 288parallel
Strand 6
B
321 323anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
92 97first strand
Strand 2
C
62 67parallel
Strand 3
C
119 123parallel
Strand 4
C
142 145parallel
Strand 5
C
155 159parallel
Strand 6
C
315 318parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
126 127first strand
Strand 2
C
148 149parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
182 183first strand
Strand 2
C
239 242parallel
Strand 3
C
267 270parallel
Strand 4
C
285 288parallel
Strand 5
C
321 323anti-parallel
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