Analysis of interatomic Contacts of Structural Units in PDB entry:
7E6U

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7E6U entry

There are 4 chains in PDB entry 7E6U (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 23	ARG 866
D	GLN 1	SER 124
C	ASP 23	ARG 866
B	GLN 1	SER 123

There are 50 helices in PDB entry 7E6U. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	43	51	Right-handed alpha
Helix 2	AA2	A	68	84	Right-handed alpha
Helix 3	AA3	A	106	115	Right-handed alpha
Helix 4	AA4	A	148	158	Right-handed alpha
Helix 5	AA5	A	189	204	Right-handed alpha
Helix 6	AA6	A	218	230	Right-handed alpha
Helix 7	AA7	A	231	234	Right-handed 310
Helix 8	AA8	A	248	263	Right-handed alpha
Helix 9	AA9	A	272	283	Right-handed alpha
Helix 10	AB1	A	310	315	Right-handed alpha
Helix 11	AB2	A	329	335	Right-handed alpha
Helix 12	AB3	A	345	356	Right-handed alpha
Helix 13	AB4	A	414	436	Right-handed alpha
Helix 14	AB5	A	458	466	Right-handed alpha
Helix 15	AB6	A	610	639	Right-handed alpha
Helix 16	AB7	A	647	669	Right-handed alpha
Helix 17	AB8	A	673	701	Right-handed alpha
Helix 18	AB9	A	720	746	Right-handed alpha
Helix 19	AC1	A	770	786	Right-handed alpha
Helix 20	AC2	A	787	797	Right-handed alpha
Helix 21	AC3	A	803	828	Right-handed alpha
Helix 22	AC4	A	829	834	Right-handed alpha
Helix 23	AC5	A	836	863	Right-handed alpha
Helix 24	AC6	D	101	108	Right-handed alpha
Helix 25	AC7	C	43	51	Right-handed alpha
Helix 26	AC8	C	68	84	Right-handed alpha
Helix 27	AC9	C	106	115	Right-handed alpha
Helix 28	AD1	C	148	158	Right-handed alpha
Helix 29	AD2	C	189	204	Right-handed alpha
Helix 30	AD3	C	218	230	Right-handed alpha
Helix 31	AD4	C	231	234	Right-handed 310
Helix 32	AD5	C	248	263	Right-handed alpha
Helix 33	AD6	C	272	283	Right-handed alpha
Helix 34	AD7	C	310	315	Right-handed alpha
Helix 35	AD8	C	329	335	Right-handed alpha
Helix 36	AD9	C	345	356	Right-handed alpha
Helix 37	AE1	C	414	436	Right-handed alpha
Helix 38	AE2	C	458	466	Right-handed alpha
Helix 39	AE3	C	610	639	Right-handed alpha
Helix 40	AE4	C	647	669	Right-handed alpha
Helix 41	AE5	C	673	701	Right-handed alpha
Helix 42	AE6	C	720	746	Right-handed alpha
Helix 43	AE7	C	770	786	Right-handed alpha
Helix 44	AE8	C	787	797	Right-handed alpha
Helix 45	AE9	C	803	828	Right-handed alpha
Helix 46	AF1	C	829	834	Right-handed alpha
Helix 47	AF2	C	836	863	Right-handed alpha
Helix 48	AF3	B	60	64	Right-handed 310
Helix 49	AF4	B	86	90	Right-handed 310
Helix 50	AF5	B	103	108	Right-handed alpha

There are 14 sheets in PDB entry 7E6U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	25	27	first strand
Strand 2	A	94	96	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	240	243	first strand
Strand 2	A	210	214	parallel
Strand 3	A	267	269	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	318	321	first strand
Strand 2	A	489	496	anti-parallel
Strand 3	A	503	511	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	550	554	first strand
Strand 2	A	563	567	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	18	23	first strand
Strand 2	D	77	82	anti-parallel
Strand 3	D	67	71	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	35	39	first strand
Strand 2	D	91	97	anti-parallel
Strand 3	D	113	114	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	35	39	first strand
Strand 2	D	91	97	anti-parallel
Strand 3	D	119	120	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	49	51	first strand
Strand 2	D	57	59	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	25	27	first strand
Strand 2	C	94	96	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	240	243	first strand
Strand 2	C	210	214	parallel
Strand 3	C	267	269	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	318	321	first strand
Strand 2	C	489	496	anti-parallel
Strand 3	C	503	511	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	550	554	first strand
Strand 2	C	563	567	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	4	7	first strand
Strand 2	B	18	24	anti-parallel
Strand 3	B	77	82	anti-parallel
Strand 4	B	67	72	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	39	first strand
Strand 2	B	91	96	anti-parallel
Strand 3	B	119	120	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7E6U

Analysis of interatomic Contacts of Structural Units in PDB entry:
7E6U