Analysis of interatomic Contacts of Structural Units in PDB entry:
7E87


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7E87 entry

There are 8 chains in PDB entry 7E87 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ASP 40LYS 437
A
 ASP 40ALA 436
J
 TRP 31ALA 58
I
 TRP 31ALA 58
C
 ASP 40LYS 437
D
 ASP 40ALA 436
E
 TRP 31ALA 58
F
 TRP 31ALA 58
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 78 helices in PDB entry 7E87. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
56 60Right-handed alpha
Helix 2
AA2
B
70 76Right-handed alpha
Helix 3
AA3
B
90 102Right-handed alpha
Helix 4
AA4
B
114 122Right-handed alpha
Helix 5
AA5
B
131 147Right-handed alpha
Helix 6
AA6
B
149 154Right-handed alpha
Helix 7
AA7
B
168 177Right-handed alpha
Helix 8
AA8
B
181 205Right-handed alpha
Helix 9
AA9
B
228 250Right-handed alpha
Helix 10
AB1
B
253 259Right-handed alpha
Helix 11
AB2
B
260 282Right-handed alpha
Helix 12
AB3
B
288 296Right-handed alpha
Helix 13
AB4
B
297 305Right-handed 310
Helix 14
AB5
B
308 319Right-handed alpha
Helix 15
AB6
B
320 347Right-handed alpha
Helix 16
AB7
B
356 369Right-handed alpha
Helix 17
AB8
B
380 400Right-handed alpha
Helix 18
AB9
B
401 434Right-handed alpha
Helix 19
AC1
A
55 61Right-handed alpha
Helix 20
AC2
A
70 75Right-handed alpha
Helix 21
AC3
A
88 101Right-handed alpha
Helix 22
AC4
A
111 123Right-handed alpha
Helix 23
AC5
A
125 129Right-handed 310
Helix 24
AC6
A
131 150Right-handed alpha
Helix 25
AC7
A
151 153Right-handed 310
Helix 26
AC8
A
167 177Right-handed alpha
Helix 27
AC9
A
181 205Right-handed alpha
Helix 28
AD1
A
228 250Right-handed alpha
Helix 29
AD2
A
253 260Right-handed alpha
Helix 30
AD3
A
260 282Right-handed alpha
Helix 31
AD4
A
288 295Right-handed alpha
Helix 32
AD5
A
296 305Right-handed 310
Helix 33
AD6
A
308 320Right-handed alpha
Helix 34
AD7
A
320 346Right-handed alpha
Helix 35
AD8
A
356 369Right-handed alpha
Helix 36
AD9
A
380 400Right-handed alpha
Helix 37
AE1
A
401 434Right-handed alpha
Helix 38
AE2
J
32 56Right-handed alpha
Helix 39
AE3
I
32 56Right-handed alpha
Helix 40
AE4
C
56 60Right-handed alpha
Helix 41
AE5
C
70 76Right-handed alpha
Helix 42
AE6
C
90 102Right-handed alpha
Helix 43
AE7
C
114 122Right-handed alpha
Helix 44
AE8
C
131 147Right-handed alpha
Helix 45
AE9
C
149 154Right-handed alpha
Helix 46
AF1
C
168 177Right-handed alpha
Helix 47
AF2
C
181 205Right-handed alpha
Helix 48
AF3
C
228 250Right-handed alpha
Helix 49
AF4
C
253 259Right-handed alpha
Helix 50
AF5
C
260 282Right-handed alpha
Helix 51
AF6
C
288 296Right-handed alpha
Helix 52
AF7
C
297 305Right-handed 310
Helix 53
AF8
C
308 319Right-handed alpha
Helix 54
AF9
C
320 347Right-handed alpha
Helix 55
AG1
C
356 369Right-handed alpha
Helix 56
AG2
C
380 400Right-handed alpha
Helix 57
AG3
C
401 434Right-handed alpha
Helix 58
AG4
D
55 61Right-handed alpha
Helix 59
AG5
D
70 75Right-handed alpha
Helix 60
AG6
D
88 101Right-handed alpha
Helix 61
AG7
D
111 123Right-handed alpha
Helix 62
AG8
D
125 129Right-handed 310
Helix 63
AG9
D
131 150Right-handed alpha
Helix 64
AH1
D
151 153Right-handed 310
Helix 65
AH2
D
167 177Right-handed alpha
Helix 66
AH3
D
181 205Right-handed alpha
Helix 67
AH4
D
228 250Right-handed alpha
Helix 68
AH5
D
253 260Right-handed alpha
Helix 69
AH6
D
260 282Right-handed alpha
Helix 70
AH7
D
288 295Right-handed alpha
Helix 71
AH8
D
296 305Right-handed 310
Helix 72
AH9
D
308 320Right-handed alpha
Helix 73
AI1
D
320 346Right-handed alpha
Helix 74
AI2
D
356 369Right-handed alpha
Helix 75
AI3
D
380 400Right-handed alpha
Helix 76
AI4
D
401 434Right-handed alpha
Helix 77
AI5
E
32 56Right-handed alpha
Helix 78
AI6
F
32 56Right-handed alpha
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There are 4 sheets in PDB entry 7E87. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 55first strand
Strand 2
B
42 46anti-parallel
Strand 3
B
83 84parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 54first strand
Strand 2
A
43 46anti-parallel
Strand 3
A
83 84parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
51 55first strand
Strand 2
C
42 46anti-parallel
Strand 3
C
83 84parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
51 54first strand
Strand 2
D
43 46anti-parallel
Strand 3
D
83 84parallel
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