Analysis of interatomic Contacts of Structural Units in PDB entry:
7E89

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7E89 entry

There are 4 chains in PDB entry 7E89 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
J	GLU 59	ILE 787
I	GLU 59	ILE 787
A	GLU 59	ILE 787
B	GLU 59	ILE 787

There are 48 helices in PDB entry 7E89. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	J	70	76	Right-handed alpha
Helix 2	AA2	J	77	80	Right-handed 310
Helix 3	AA3	J	118	122	Right-handed 310
Helix 4	AA4	J	229	234	Right-handed alpha
Helix 5	AA5	J	517	527	Right-handed alpha
Helix 6	AA6	J	582	592	Right-handed alpha
Helix 7	AA7	J	607	613	Right-handed alpha
Helix 8	AA8	J	619	634	Right-handed alpha
Helix 9	AA9	J	650	659	Right-handed alpha
Helix 10	AB1	J	682	686	Right-handed 310
Helix 11	AB2	J	687	696	Right-handed alpha
Helix 12	AB3	J	734	749	Right-handed alpha
Helix 13	AB4	J	766	786	Right-handed alpha
Helix 14	AB5	I	70	76	Right-handed 310
Helix 15	AB6	I	228	234	Right-handed alpha
Helix 16	AB7	I	517	527	Right-handed alpha
Helix 17	AB8	I	582	591	Right-handed alpha
Helix 18	AB9	I	607	613	Right-handed alpha
Helix 19	AC1	I	619	635	Right-handed alpha
Helix 20	AC2	I	650	659	Right-handed alpha
Helix 21	AC3	I	687	696	Right-handed alpha
Helix 22	AC4	I	710	715	Right-handed alpha
Helix 23	AC5	I	734	749	Right-handed alpha
Helix 24	AC6	I	766	785	Right-handed alpha
Helix 25	AC7	A	70	76	Right-handed alpha
Helix 26	AC8	A	77	80	Right-handed 310
Helix 27	AC9	A	118	122	Right-handed 310
Helix 28	AD1	A	229	234	Right-handed alpha
Helix 29	AD2	A	517	527	Right-handed alpha
Helix 30	AD3	A	582	592	Right-handed alpha
Helix 31	AD4	A	607	613	Right-handed alpha
Helix 32	AD5	A	619	634	Right-handed alpha
Helix 33	AD6	A	650	659	Right-handed alpha
Helix 34	AD7	A	682	686	Right-handed 310
Helix 35	AD8	A	687	696	Right-handed alpha
Helix 36	AD9	A	734	749	Right-handed alpha
Helix 37	AE1	A	766	786	Right-handed alpha
Helix 38	AE2	B	70	76	Right-handed 310
Helix 39	AE3	B	228	234	Right-handed alpha
Helix 40	AE4	B	517	527	Right-handed alpha
Helix 41	AE5	B	582	591	Right-handed alpha
Helix 42	AE6	B	607	613	Right-handed alpha
Helix 43	AE7	B	619	635	Right-handed alpha
Helix 44	AE8	B	650	659	Right-handed alpha
Helix 45	AE9	B	687	696	Right-handed alpha
Helix 46	AF1	B	710	715	Right-handed alpha
Helix 47	AF2	B	734	749	Right-handed alpha
Helix 48	AF3	B	766	785	Right-handed alpha

There are 54 sheets in PDB entry 7E89. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	88	90	first strand
Strand 2	J	93	94	anti-parallel
Strand 3	J	103	107	anti-parallel
Strand 4	J	112	117	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	129	132	first strand
Strand 2	J	138	143	anti-parallel
Strand 3	J	156	161	anti-parallel
Strand 4	J	168	169	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	192	196	first strand
Strand 2	J	199	203	anti-parallel
Strand 3	J	211	214	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	222	224	first strand
Strand 2	J	250	257	anti-parallel
Strand 3	J	242	244	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	222	224	first strand
Strand 2	J	250	257	anti-parallel
Strand 3	J	291	298	anti-parallel
Strand 4	J	306	307	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	264	266	first strand
Strand 2	J	278	280	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	319	326	first strand
Strand 2	J	331	338	anti-parallel
Strand 3	J	343	350	anti-parallel
Strand 4	J	355	363	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	384	389	first strand
Strand 2	J	399	404	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	425	432	first strand
Strand 2	J	437	442	anti-parallel
Strand 3	J	451	455	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	478	481	first strand
Strand 2	J	487	491	anti-parallel
Strand 3	J	500	504	anti-parallel
Strand 4	J	513	515	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	531	534	first strand
Strand 2	J	546	550	anti-parallel
Strand 3	J	594	598	anti-parallel
Strand 4	J	560	565	parallel
Strand 5	J	639	647	parallel
Strand 6	J	673	674	parallel
Strand 7	J	721	722	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	537	539	first strand
Strand 2	J	542	544	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	725	727	first strand
Strand 2	J	755	757	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	88	90	first strand
Strand 2	I	93	94	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	103	107	first strand
Strand 2	I	112	117	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	129	132	first strand
Strand 2	I	138	143	anti-parallel
Strand 3	I	156	161	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	192	195	first strand
Strand 2	I	200	203	anti-parallel
Strand 3	I	211	214	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	222	224	first strand
Strand 2	I	250	257	anti-parallel
Strand 3	I	242	244	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	222	224	first strand
Strand 2	I	250	257	anti-parallel
Strand 3	I	291	298	anti-parallel
Strand 4	I	306	307	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	263	266	first strand
Strand 2	I	278	281	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	319	326	first strand
Strand 2	I	331	338	anti-parallel
Strand 3	I	343	350	anti-parallel
Strand 4	I	356	363	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	384	389	first strand
Strand 2	I	399	404	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	425	432	first strand
Strand 2	I	437	442	anti-parallel
Strand 3	I	451	455	anti-parallel
Strand 4	I	464	465	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	478	481	first strand
Strand 2	I	487	491	anti-parallel
Strand 3	I	500	504	anti-parallel
Strand 4	I	513	515	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	531	532	first strand
Strand 2	I	546	550	anti-parallel
Strand 3	I	594	598	anti-parallel
Strand 4	I	560	565	parallel
Strand 5	I	639	647	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	537	539	first strand
Strand 2	I	542	544	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	722	727	first strand
Strand 2	I	752	757	parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	88	90	first strand
Strand 2	A	93	94	anti-parallel
Strand 3	A	103	107	anti-parallel
Strand 4	A	112	117	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	129	132	first strand
Strand 2	A	138	143	anti-parallel
Strand 3	A	156	161	anti-parallel
Strand 4	A	168	169	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	192	196	first strand
Strand 2	A	199	203	anti-parallel
Strand 3	A	211	214	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	222	224	first strand
Strand 2	A	250	257	anti-parallel
Strand 3	A	242	244	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	222	224	first strand
Strand 2	A	250	257	anti-parallel
Strand 3	A	291	298	anti-parallel
Strand 4	A	306	307	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	264	266	first strand
Strand 2	A	278	280	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	319	326	first strand
Strand 2	A	331	338	anti-parallel
Strand 3	A	343	350	anti-parallel
Strand 4	A	355	363	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	384	389	first strand
Strand 2	A	399	404	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	425	432	first strand
Strand 2	A	437	442	anti-parallel
Strand 3	A	451	455	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	478	481	first strand
Strand 2	A	487	491	anti-parallel
Strand 3	A	500	504	anti-parallel
Strand 4	A	513	515	anti-parallel

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There are 7 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	531	534	first strand
Strand 2	A	546	550	anti-parallel
Strand 3	A	594	598	anti-parallel
Strand 4	A	560	565	parallel
Strand 5	A	639	647	parallel
Strand 6	A	673	674	parallel
Strand 7	A	721	722	parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	537	539	first strand
Strand 2	A	542	544	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	725	727	first strand
Strand 2	A	755	757	parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	88	90	first strand
Strand 2	B	93	94	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	103	107	first strand
Strand 2	B	112	117	anti-parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	129	132	first strand
Strand 2	B	138	143	anti-parallel
Strand 3	B	156	161	anti-parallel

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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	192	195	first strand
Strand 2	B	200	203	anti-parallel
Strand 3	B	211	214	anti-parallel

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There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	222	224	first strand
Strand 2	B	250	257	anti-parallel
Strand 3	B	242	244	anti-parallel

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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	222	224	first strand
Strand 2	B	250	257	anti-parallel
Strand 3	B	291	298	anti-parallel
Strand 4	B	306	307	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	263	266	first strand
Strand 2	B	278	281	anti-parallel

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There are 4 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	319	326	first strand
Strand 2	B	331	338	anti-parallel
Strand 3	B	343	350	anti-parallel
Strand 4	B	356	363	anti-parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	384	389	first strand
Strand 2	B	399	404	anti-parallel

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There are 4 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	425	432	first strand
Strand 2	B	437	442	anti-parallel
Strand 3	B	451	455	anti-parallel
Strand 4	B	464	465	anti-parallel

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There are 4 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	478	481	first strand
Strand 2	B	487	491	anti-parallel
Strand 3	B	500	504	anti-parallel
Strand 4	B	513	515	anti-parallel

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There are 5 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	531	532	first strand
Strand 2	B	548	550	anti-parallel
Strand 3	B	594	596	anti-parallel
Strand 4	B	560	565	parallel
Strand 5	B	639	647	parallel

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There are 2 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	537	539	first strand
Strand 2	B	542	544	anti-parallel

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There are 2 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	722	727	first strand
Strand 2	B	752	757	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7E89

Analysis of interatomic Contacts of Structural Units in PDB entry:
7E89