Analysis of interatomic Contacts of Structural Units in PDB entry:
7E8E

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7E8E entry

There are 12 chains in PDB entry 7E8E (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
G	PRO 36	MET 216
C	ALA 2	ASP 495
K	ALA 28	ALA 58
H	GLU 37	MET 216
D	ALA 2	ASP 495
L	ALA 31	ALA 58
E	PRO 36	MET 216
A	ALA 2	ASP 495
I	ALA 28	ALA 58
F	GLU 37	MET 216
B	ALA 2	ASP 495
J	ALA 31	ALA 58

There are134 helices in PDB entry 7E8E. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	G	49	62	Right-handed alpha
Helix 2	AA2	G	71	80	Right-handed alpha
Helix 3	AA3	G	87	99	Right-handed alpha
Helix 4	AA4	G	100	103	Right-handed 310
Helix 5	AA5	G	108	120	Right-handed alpha
Helix 6	AA6	G	122	135	Right-handed alpha
Helix 7	AA7	G	145	156	Right-handed alpha
Helix 8	AA8	G	168	182	Right-handed alpha
Helix 9	AA9	G	192	199	Right-handed alpha
Helix 10	AB1	G	202	215	Right-handed alpha
Helix 11	AB2	C	2	7	Right-handed 310
Helix 12	AB3	C	8	19	Right-handed alpha
Helix 13	AB4	C	56	60	Right-handed alpha
Helix 14	AB5	C	88	102	Right-handed alpha
Helix 15	AB6	C	111	122	Right-handed alpha
Helix 16	AB7	C	125	129	Right-handed 310
Helix 17	AB8	C	133	152	Right-handed alpha
Helix 18	AB9	C	168	177	Right-handed alpha
Helix 19	AC1	C	181	205	Right-handed alpha
Helix 20	AC2	C	207	212	Right-handed alpha
Helix 21	AC3	C	228	251	Right-handed alpha
Helix 22	AC4	C	260	269	Right-handed alpha
Helix 23	AC5	C	270	281	Right-handed alpha
Helix 24	AC6	C	288	295	Right-handed alpha
Helix 25	AC7	C	296	305	Right-handed 310
Helix 26	AC8	C	307	318	Right-handed alpha
Helix 27	AC9	C	321	346	Right-handed alpha
Helix 28	AD1	C	356	367	Right-handed alpha
Helix 29	AD2	C	380	400	Right-handed alpha
Helix 30	AD3	C	402	450	Right-handed alpha
Helix 31	AD4	C	473	489	Right-handed alpha
Helix 32	AD5	K	29	56	Right-handed alpha
Helix 33	AD6	H	49	64	Right-handed alpha
Helix 34	AD7	H	70	82	Right-handed alpha
Helix 35	AD8	H	87	99	Right-handed alpha
Helix 36	AD9	H	100	103	Right-handed 310
Helix 37	AE1	H	107	120	Right-handed alpha
Helix 38	AE2	H	122	135	Right-handed alpha
Helix 39	AE3	H	143	156	Right-handed alpha
Helix 40	AE4	H	168	182	Right-handed alpha
Helix 41	AE5	H	192	200	Right-handed alpha
Helix 42	AE6	H	202	208	Right-handed alpha
Helix 43	AE7	H	209	214	Right-handed alpha
Helix 44	AE8	D	5	7	Right-handed 310
Helix 45	AE9	D	8	17	Right-handed alpha
Helix 46	AF1	D	18	20	Right-handed 310
Helix 47	AF2	D	55	61	Right-handed alpha
Helix 48	AF3	D	70	74	Right-handed 310
Helix 49	AF4	D	90	102	Right-handed alpha
Helix 50	AF5	D	111	122	Right-handed alpha
Helix 51	AF6	D	125	129	Right-handed 310
Helix 52	AF7	D	130	153	Right-handed alpha
Helix 53	AF8	D	170	177	Right-handed alpha
Helix 54	AF9	D	181	207	Right-handed alpha
Helix 55	AG1	D	207	212	Right-handed alpha
Helix 56	AG2	D	228	250	Right-handed alpha
Helix 57	AG3	D	255	260	Right-handed alpha
Helix 58	AG4	D	260	283	Right-handed alpha
Helix 59	AG5	D	288	296	Right-handed alpha
Helix 60	AG6	D	298	303	Right-handed alpha
Helix 61	AG7	D	307	320	Right-handed alpha
Helix 62	AG8	D	320	347	Right-handed alpha
Helix 63	AG9	D	356	369	Right-handed alpha
Helix 64	AH1	D	380	400	Right-handed alpha
Helix 65	AH2	D	401	450	Right-handed alpha
Helix 66	AH3	D	473	489	Right-handed alpha
Helix 67	AH4	L	32	56	Right-handed alpha
Helix 68	AH5	E	49	62	Right-handed alpha
Helix 69	AH6	E	71	80	Right-handed alpha
Helix 70	AH7	E	87	99	Right-handed alpha
Helix 71	AH8	E	100	103	Right-handed 310
Helix 72	AH9	E	108	120	Right-handed alpha
Helix 73	AI1	E	122	135	Right-handed alpha
Helix 74	AI2	E	145	156	Right-handed alpha
Helix 75	AI3	E	168	182	Right-handed alpha
Helix 76	AI4	E	192	199	Right-handed alpha
Helix 77	AI5	E	202	215	Right-handed alpha
Helix 78	AI6	A	2	7	Right-handed 310
Helix 79	AI7	A	8	19	Right-handed alpha
Helix 80	AI8	A	56	60	Right-handed alpha
Helix 81	AI9	A	88	102	Right-handed alpha
Helix 82	AJ1	A	111	122	Right-handed alpha
Helix 83	AJ2	A	125	129	Right-handed 310
Helix 84	AJ3	A	133	152	Right-handed alpha
Helix 85	AJ4	A	168	177	Right-handed alpha
Helix 86	AJ5	A	181	205	Right-handed alpha
Helix 87	AJ6	A	207	212	Right-handed alpha
Helix 88	AJ7	A	228	251	Right-handed alpha
Helix 89	AJ8	A	260	269	Right-handed alpha
Helix 90	AJ9	A	270	281	Right-handed alpha
Helix 91	AK1	A	288	295	Right-handed alpha
Helix 92	AK2	A	296	305	Right-handed 310
Helix 93	AK3	A	307	318	Right-handed alpha
Helix 94	AK4	A	321	346	Right-handed alpha
Helix 95	AK5	A	356	367	Right-handed alpha
Helix 96	AK6	A	380	400	Right-handed alpha
Helix 97	AK7	A	402	450	Right-handed alpha
Helix 98	AK8	A	473	489	Right-handed alpha
Helix 99	AK9	I	29	55	Right-handed alpha
Helix 100	AL1	F	49	64	Right-handed alpha
Helix 101	AL2	F	70	82	Right-handed alpha
Helix 102	AL3	F	87	99	Right-handed alpha
Helix 103	AL4	F	100	103	Right-handed 310
Helix 104	AL5	F	107	120	Right-handed alpha
Helix 105	AL6	F	122	135	Right-handed alpha
Helix 106	AL7	F	143	156	Right-handed alpha
Helix 107	AL8	F	168	182	Right-handed alpha
Helix 108	AL9	F	192	200	Right-handed alpha
Helix 109	AM1	F	202	208	Right-handed alpha
Helix 110	AM2	F	209	214	Right-handed alpha
Helix 111	AM3	B	5	7	Right-handed 310
Helix 112	AM4	B	8	17	Right-handed alpha
Helix 113	AM5	B	18	20	Right-handed 310
Helix 114	AM6	B	55	61	Right-handed alpha
Helix 115	AM7	B	70	74	Right-handed 310
Helix 116	AM8	B	90	102	Right-handed alpha
Helix 117	AM9	B	111	122	Right-handed alpha
Helix 118	AN1	B	125	129	Right-handed 310
Helix 119	AN2	B	130	153	Right-handed alpha
Helix 120	AN3	B	170	177	Right-handed alpha
Helix 121	AN4	B	181	207	Right-handed alpha
Helix 122	AN5	B	207	212	Right-handed alpha
Helix 123	AN6	B	228	250	Right-handed alpha
Helix 124	AN7	B	255	260	Right-handed alpha
Helix 125	AN8	B	260	283	Right-handed alpha
Helix 126	AN9	B	288	296	Right-handed alpha
Helix 127	AO1	B	298	303	Right-handed alpha
Helix 128	AO2	B	307	320	Right-handed alpha
Helix 129	AO3	B	320	347	Right-handed alpha
Helix 130	AO4	B	356	369	Right-handed alpha
Helix 131	AO5	B	380	400	Right-handed alpha
Helix 132	AO6	B	401	450	Right-handed alpha
Helix 133	AO7	B	473	489	Right-handed alpha
Helix 134	AO8	J	32	56	Right-handed alpha

There are 6 sheets in PDB entry 7E8E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	68	70	first strand
Strand 2	G	105	107	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	50	55	first strand
Strand 2	C	42	47	anti-parallel
Strand 3	C	83	85	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	51	54	first strand
Strand 2	D	43	47	anti-parallel
Strand 3	D	82	85	parallel
Strand 4	D	76	77	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	68	70	first strand
Strand 2	E	105	107	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	50	55	first strand
Strand 2	A	42	47	anti-parallel
Strand 3	A	83	85	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	51	54	first strand
Strand 2	B	43	47	anti-parallel
Strand 3	B	82	85	parallel
Strand 4	B	76	77	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7E8E

Analysis of interatomic Contacts of Structural Units in PDB entry:
7E8E