Analysis of interatomic Contacts of Structural Units in PDB entry:
7E8I

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7E8I entry

There are 12 chains in PDB entry 7E8I (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
J	T 2	A 146
I	T 2	A 146
A	PRO 38	GLU 133
B	GLY 13	GLY 101
C	THR 10	PRO 117
D	ARG 30	ALA 121
E	LYS 37	ALA 135
F	ARG 19	GLY 102
G	LYS 13	PRO 117
H	THR 29	ALA 121
K	GLY 422	LEU 775
L	MET 1	CYS 76

There are 54 helices in PDB entry 7E8I. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	44	55	Right-handed alpha
Helix 2	AA2	A	63	76	Right-handed alpha
Helix 3	AA3	A	85	95	Right-handed alpha
Helix 4	AA4	A	96	114	Right-handed alpha
Helix 5	AA5	A	120	132	Right-handed alpha
Helix 6	AA6	B	24	29	Right-handed 310
Helix 7	AA7	B	30	42	Right-handed alpha
Helix 8	AA8	B	49	76	Right-handed alpha
Helix 9	AA9	B	83	93	Right-handed alpha
Helix 10	AB1	C	16	21	Right-handed alpha
Helix 11	AB2	C	26	36	Right-handed alpha
Helix 12	AB3	C	45	73	Right-handed alpha
Helix 13	AB4	C	79	90	Right-handed alpha
Helix 14	AB5	C	90	98	Right-handed alpha
Helix 15	AB6	D	34	46	Right-handed alpha
Helix 16	AB7	D	52	81	Right-handed alpha
Helix 17	AB8	D	87	99	Right-handed alpha
Helix 18	AB9	D	101	120	Right-handed alpha
Helix 19	AC1	E	44	55	Right-handed alpha
Helix 20	AC2	E	63	75	Right-handed alpha
Helix 21	AC3	E	85	114	Right-handed alpha
Helix 22	AC4	E	120	131	Right-handed alpha
Helix 23	AC5	F	25	29	Right-handed 310
Helix 24	AC6	F	30	42	Right-handed alpha
Helix 25	AC7	F	49	76	Right-handed alpha
Helix 26	AC8	F	82	93	Right-handed alpha
Helix 27	AC9	G	16	21	Right-handed alpha
Helix 28	AD1	G	26	37	Right-handed alpha
Helix 29	AD2	G	45	73	Right-handed alpha
Helix 30	AD3	G	79	90	Right-handed alpha
Helix 31	AD4	G	90	97	Right-handed alpha
Helix 32	AD5	H	34	46	Right-handed alpha
Helix 33	AD6	H	53	81	Right-handed alpha
Helix 34	AD7	H	88	99	Right-handed alpha
Helix 35	AD8	H	101	120	Right-handed alpha
Helix 36	AD9	K	430	438	Right-handed alpha
Helix 37	AE1	K	440	449	Right-handed alpha
Helix 38	AE2	K	463	472	Right-handed alpha
Helix 39	AE3	K	474	483	Right-handed alpha
Helix 40	AE4	K	496	504	Right-handed alpha
Helix 41	AE5	K	506	515	Right-handed alpha
Helix 42	AE6	K	530	535	Right-handed alpha
Helix 43	AE7	K	536	544	Right-handed alpha
Helix 44	AE8	K	578	592	Right-handed alpha
Helix 45	AE9	K	617	627	Right-handed alpha
Helix 46	AF1	K	633	643	Right-handed alpha
Helix 47	AF2	K	655	666	Right-handed alpha
Helix 48	AF3	K	687	698	Right-handed alpha
Helix 49	AF4	K	711	716	Right-handed alpha
Helix 50	AF5	K	760	770	Right-handed alpha
Helix 51	AF6	L	22	30	Right-handed alpha
Helix 52	AF7	L	30	35	Right-handed alpha
Helix 53	AF8	L	37	41	Right-handed 310
Helix 54	AF9	L	55	59	Right-handed 310

There are 12 sheets in PDB entry 7E8I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	84	first strand
Strand 2	B	80	81	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	118	119	first strand
Strand 2	B	45	46	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	96	98	first strand
Strand 2	G	100	102	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	42	43	first strand
Strand 2	D	85	86	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	77	78	first strand
Strand 2	D	50	51	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	100	102	first strand
Strand 2	F	96	98	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	83	84	first strand
Strand 2	F	80	81	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	118	119	first strand
Strand 2	F	45	46	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	77	78	first strand
Strand 2	H	50	51	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	572	574	first strand
Strand 2	K	606	608	parallel
Strand 3	K	629	631	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	701	702	first strand
Strand 2	K	676	679	parallel
Strand 3	K	735	739	parallel
Strand 4	K	755	759	parallel
Strand 5	K	751	752	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	12	16	first strand
Strand 2	L	2	7	anti-parallel
Strand 3	L	66	69	parallel
Strand 4	L	43	44	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7E8I

Analysis of interatomic Contacts of Structural Units in PDB entry:
7E8I