Analysis of interatomic Contacts of Structural Units in PDB entry:
7E8N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7E8N entry

There are 3 chains in PDB entry 7E8N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 3ARG 430
B
 MET 1LYS 431
C
 MET 1LYS 431
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 7E8N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 39Right-handed alpha
Helix 2
AA2
A
45 48Right-handed 310
Helix 3
AA3
A
74 81Right-handed alpha
Helix 4
AA4
A
82 93Right-handed alpha
Helix 5
AA5
A
97 111Right-handed alpha
Helix 6
AA6
A
115 124Right-handed alpha
Helix 7
AA7
A
130 146Right-handed alpha
Helix 8
AA8
A
147 151Right-handed 310
Helix 9
AA9
A
155 183Right-handed alpha
Helix 10
AB1
A
194 205Right-handed alpha
Helix 11
AB2
A
214 229Right-handed alpha
Helix 12
AB3
A
234 246Right-handed alpha
Helix 13
AB4
A
249 263Right-handed alpha
Helix 14
AB5
A
268 284Right-handed alpha
Helix 15
AB6
A
286 296Right-handed alpha
Helix 16
AB7
A
315 332Right-handed alpha
Helix 17
AB8
A
337 353Right-handed alpha
Helix 18
AB9
A
353 359Right-handed alpha
Helix 19
AC1
A
365 376Right-handed alpha
Helix 20
AC2
A
379 381Right-handed 310
Helix 21
AC3
A
382 405Right-handed alpha
Helix 22
AC4
A
426 430Right-handed 310
Helix 23
AC5
B
33 39Right-handed alpha
Helix 24
AC6
B
44 48Right-handed 310
Helix 25
AC7
B
74 81Right-handed alpha
Helix 26
AC8
B
82 93Right-handed alpha
Helix 27
AC9
B
97 111Right-handed alpha
Helix 28
AD1
B
115 123Right-handed alpha
Helix 29
AD2
B
130 146Right-handed alpha
Helix 30
AD3
B
147 151Right-handed 310
Helix 31
AD4
B
155 183Right-handed alpha
Helix 32
AD5
B
194 205Right-handed alpha
Helix 33
AD6
B
214 229Right-handed alpha
Helix 34
AD7
B
234 246Right-handed alpha
Helix 35
AD8
B
249 263Right-handed alpha
Helix 36
AD9
B
268 283Right-handed alpha
Helix 37
AE1
B
288 294Right-handed alpha
Helix 38
AE2
B
315 332Right-handed alpha
Helix 39
AE3
B
337 351Right-handed alpha
Helix 40
AE4
B
353 359Right-handed alpha
Helix 41
AE5
B
364 367Right-handed 310
Helix 42
AE6
B
368 376Right-handed alpha
Helix 43
AE7
B
379 381Right-handed 310
Helix 44
AE8
B
382 405Right-handed alpha
Helix 45
AE9
B
426 430Right-handed 310
Helix 46
AF1
C
33 39Right-handed alpha
Helix 47
AF2
C
74 81Right-handed alpha
Helix 48
AF3
C
82 93Right-handed alpha
Helix 49
AF4
C
97 112Right-handed alpha
Helix 50
AF5
C
115 124Right-handed alpha
Helix 51
AF6
C
130 146Right-handed alpha
Helix 52
AF7
C
147 151Right-handed 310
Helix 53
AF8
C
155 183Right-handed alpha
Helix 54
AF9
C
194 205Right-handed alpha
Helix 55
AG1
C
214 229Right-handed alpha
Helix 56
AG2
C
234 246Right-handed alpha
Helix 57
AG3
C
249 263Right-handed alpha
Helix 58
AG4
C
271 283Right-handed alpha
Helix 59
AG5
C
286 294Right-handed alpha
Helix 60
AG6
C
301 305Right-handed 310
Helix 61
AG7
C
317 332Right-handed alpha
Helix 62
AG8
C
337 351Right-handed alpha
Helix 63
AG9
C
353 359Right-handed alpha
Helix 64
AH1
C
364 376Right-handed alpha
Helix 65
AH2
C
379 381Right-handed 310
Helix 66
AH3
C
382 405Right-handed alpha
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There are 5 sheets in PDB entry 7E8N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
413 416first strand
Strand 2
C
50 55parallel
Strand 3
A
40 43parallel
Strand 4
C
27 30parallel
Strand 5
C
13 21anti-parallel
Strand 6
C
4 9anti-parallel
Strand 7
A
4 8anti-parallel
Strand 8
A
14 21anti-parallel
Strand 9
A
27 30anti-parallel
Strand 10
C
40 43parallel
Strand 11
A
50 55parallel
Strand 12
C
413 416parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 61first strand
Strand 2
A
66 69anti-parallel
Strand 3
A
72 73anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 8first strand
Strand 2
B
14 21anti-parallel
Strand 3
B
27 29anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 61first strand
Strand 2
B
66 69anti-parallel
Strand 3
B
72 73anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
58 61first strand
Strand 2
C
66 69anti-parallel
Strand 3
C
72 73anti-parallel
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