Analysis of interatomic Contacts of Structural Units in PDB entry:
7E8T

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7E8T entry

There are 9 chains in PDB entry 7E8T (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
L	GLY 7	LYS 200
I	GLN 250	ASN 1084
J	ASN 265	ILE 1289
K	LEU 212	ILE 559
B	SER 36	GLN 263
G	THR 25	LEU 280
E	MET 1	GLN 219
H	PRO 2	LEU 173
A	LEU 3	LEU 3

There are 97 helices in PDB entry 7E8T. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	L	25	34	Right-handed alpha
Helix 2	AA2	L	75	83	Right-handed alpha
Helix 3	AA3	L	99	113	Right-handed alpha
Helix 4	AA4	L	127	131	Right-handed 310
Helix 5	AA5	L	137	147	Right-handed alpha
Helix 6	AA6	L	160	179	Right-handed alpha
Helix 7	AA7	I	256	269	Right-handed alpha
Helix 8	AA8	I	278	290	Right-handed alpha
Helix 9	AA9	I	299	316	Right-handed alpha
Helix 10	AB1	I	319	341	Right-handed alpha
Helix 11	AB2	I	346	368	Right-handed alpha
Helix 12	AB3	I	401	419	Right-handed alpha
Helix 13	AB4	I	426	440	Right-handed alpha
Helix 14	AB5	I	452	460	Right-handed alpha
Helix 15	AB6	I	466	482	Right-handed alpha
Helix 16	AB7	I	496	509	Right-handed alpha
Helix 17	AB8	I	515	524	Right-handed alpha
Helix 18	AB9	I	524	529	Right-handed alpha
Helix 19	AC1	I	861	871	Right-handed alpha
Helix 20	AC2	I	880	885	Right-handed alpha
Helix 21	AC3	I	889	897	Right-handed alpha
Helix 22	AC4	I	898	900	Right-handed 310
Helix 23	AC5	I	903	907	Right-handed 310
Helix 24	AC6	I	920	930	Right-handed alpha
Helix 25	AC7	I	933	947	Right-handed alpha
Helix 26	AC8	I	958	962	Right-handed 310
Helix 27	AC9	J	266	286	Right-handed alpha
Helix 28	AD1	J	308	327	Right-handed alpha
Helix 29	AD2	J	379	397	Right-handed alpha
Helix 30	AD3	J	403	408	Right-handed alpha
Helix 31	AD4	J	412	417	Right-handed alpha
Helix 32	AD5	J	425	443	Right-handed alpha
Helix 33	AD6	J	463	475	Right-handed alpha
Helix 34	AD7	J	476	478	Right-handed 310
Helix 35	AD8	J	489	494	Right-handed alpha
Helix 36	AD9	J	506	525	Right-handed alpha
Helix 37	AE1	J	528	543	Right-handed alpha
Helix 38	AE2	J	551	565	Right-handed alpha
Helix 39	AE3	J	585	603	Right-handed alpha
Helix 40	AE4	J	605	615	Right-handed alpha
Helix 41	AE5	J	629	642	Right-handed alpha
Helix 42	AE6	J	896	899	Right-handed 310
Helix 43	AE7	J	900	906	Right-handed alpha
Helix 44	AE8	J	1018	1028	Right-handed alpha
Helix 45	AE9	J	1110	1129	Right-handed alpha
Helix 46	AF1	J	1157	1164	Right-handed alpha
Helix 47	AF2	J	1165	1169	Right-handed 310
Helix 48	AF3	J	1198	1201	Right-handed 310
Helix 49	AF4	K	237	248	Right-handed alpha
Helix 50	AF5	K	317	321	Right-handed 310
Helix 51	AF6	K	485	499	Right-handed alpha
Helix 52	AF7	B	42	50	Right-handed alpha
Helix 53	AF8	B	51	61	Right-handed alpha
Helix 54	AF9	B	100	104	Right-handed 310
Helix 55	AG1	B	112	142	Right-handed alpha
Helix 56	AG2	B	153	164	Right-handed alpha
Helix 57	AG3	B	164	170	Right-handed alpha
Helix 58	AG4	B	192	196	Right-handed 310
Helix 59	AG5	B	204	212	Right-handed alpha
Helix 60	AG6	B	213	215	Right-handed 310
Helix 61	AG7	B	216	228	Right-handed alpha
Helix 62	AG8	G	59	74	Right-handed alpha
Helix 63	AG9	G	79	107	Right-handed alpha
Helix 64	AH1	G	175	192	Right-handed alpha
Helix 65	AH2	G	227	229	Right-handed 310
Helix 66	AH3	G	230	243	Right-handed alpha
Helix 67	AH4	G	271	276	Right-handed alpha
Helix 68	AH5	G	277	280	Right-handed 310
Helix 69	AH6	E	31	50	Right-handed alpha
Helix 70	AH7	E	170	180	Right-handed alpha
Helix 71	AH8	E	180	190	Right-handed alpha
Helix 72	AH9	E	207	219	Right-handed alpha
Helix 73	AI1	H	36	44	Right-handed alpha
Helix 74	AI2	H	45	51	Right-handed alpha
Helix 75	AI3	H	130	146	Right-handed alpha
Helix 76	AI4	H	158	173	Right-handed alpha
Helix 77	AI5	A	37	46	Right-handed alpha
Helix 78	AI6	A	93	95	Right-handed 310
Helix 79	AI7	A	99	120	Right-handed alpha
Helix 80	AI8	A	130	145	Right-handed alpha
Helix 81	AI9	D	36	58	Right-handed alpha
Helix 82	AJ1	D	99	110	Right-handed alpha
Helix 83	AJ2	D	110	115	Right-handed alpha
Helix 84	AJ3	D	142	154	Right-handed alpha
Helix 85	AJ4	F	9	20	Right-handed alpha
Helix 86	AJ5	F	27	44	Right-handed alpha
Helix 87	AJ6	F	48	75	Right-handed alpha
Helix 88	AJ7	F	82	93	Right-handed alpha
Helix 89	AJ8	F	131	135	Right-handed 310
Helix 90	AJ9	F	143	155	Right-handed alpha
Helix 91	AK1	C	10	18	Right-handed alpha
Helix 92	AK2	C	30	46	Right-handed alpha
Helix 93	AK3	C	52	75	Right-handed alpha
Helix 94	AK4	C	84	93	Right-handed alpha
Helix 95	AK5	C	94	100	Right-handed alpha
Helix 96	AK6	C	131	135	Right-handed 310
Helix 97	AK7	C	143	153	Right-handed alpha

There are 37 sheets in PDB entry 7E8T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	49	57	first strand
Strand 2	L	60	68	anti-parallel
Strand 3	L	12	19	parallel
Strand 4	L	88	94	parallel
Strand 5	L	120	126	parallel
Strand 6	L	151	154	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	563	564	first strand
Strand 2	I	581	582	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	570	571	first strand
Strand 2	I	574	575	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	644	645	first strand
Strand 2	I	649	650	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	686	688	first strand
Strand 2	I	729	731	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	722	723	first strand
Strand 2	I	699	703	anti-parallel
Strand 3	I	743	746	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	739	741	first strand
Strand 2	I	762	764	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	769	777	first strand
Strand 2	I	782	790	anti-parallel
Strand 3	I	836	841	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	801	802	first strand
Strand 2	I	819	820	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	804	805	first strand
Strand 2	I	854	855	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	988	990	first strand
Strand 2	I	1033	1035	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1007	1008	first strand
Strand 2	I	1076	1077	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	656	658	first strand
Strand 2	J	739	743	anti-parallel
Strand 3	J	778	781	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	751	752	first strand
Strand 2	J	772	773	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	754	757	first strand
Strand 2	J	802	804	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	964	966	first strand
Strand 2	J	986	988	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	995	1004	first strand
Strand 2	J	1038	1046	anti-parallel
Strand 3	J	1074	1080	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1055	1057	first strand
Strand 2	J	1132	1136	anti-parallel
Strand 3	J	1144	1145	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1171	1176	first strand
Strand 2	J	1188	1196	anti-parallel
Strand 3	J	1250	1255	anti-parallel
Strand 4	J	1231	1234	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1181	1182	first strand
Strand 2	J	1284	1288	parallel
Strand 3	J	1260	1267	anti-parallel
Strand 4	J	1211	1217	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1208	1209	first strand
Strand 2	J	1241	1242	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	214	217	first strand
Strand 2	K	233	236	anti-parallel
Strand 3	K	289	291	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	220	223	first strand
Strand 2	K	227	230	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	257	263	first strand
Strand 2	K	307	316	anti-parallel
Strand 3	K	326	331	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	403	404	first strand
Strand 2	K	411	414	anti-parallel
Strand 3	K	426	434	anti-parallel
Strand 4	K	520	526	anti-parallel
Strand 5	K	500	502	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	443	446	first strand
Strand 2	K	539	542	anti-parallel
Strand 3	K	548	550	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	39	41	first strand
Strand 2	C	23	25	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	87	89	first strand
Strand 2	B	96	98	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	175	179	first strand
Strand 2	B	183	188	anti-parallel
Strand 3	B	258	260	anti-parallel
Strand 4	B	237	238	anti-parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	33	34	first strand
Strand 2	H	14	20	parallel
Strand 3	H	3	8	anti-parallel
Strand 4	H	113	115	anti-parallel
Strand 5	H	98	103	anti-parallel
Strand 6	H	88	95	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	56	58	first strand
Strand 2	F	24	26	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	198	201	first strand
Strand 2	G	209	212	anti-parallel
Strand 3	G	265	268	anti-parallel
Strand 4	G	250	253	anti-parallel

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There are 10 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	15	20	first strand
Strand 2	E	5	9	anti-parallel
Strand 3	E	140	144	anti-parallel
Strand 4	E	128	132	anti-parallel
Strand 5	E	119	123	anti-parallel
Strand 6	D	69	72	anti-parallel
Strand 7	D	76	82	anti-parallel
Strand 8	D	86	92	anti-parallel
Strand 9	D	3	9	anti-parallel
Strand 10	D	15	20	anti-parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	17	21	first strand
Strand 2	A	7	11	anti-parallel
Strand 3	A	85	91	anti-parallel
Strand 4	A	72	78	anti-parallel
Strand 5	A	68	69	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	104	106	first strand
Strand 2	F	114	119	anti-parallel
Strand 3	F	174	182	anti-parallel
Strand 4	F	158	165	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	103	106	first strand
Strand 2	C	115	119	anti-parallel
Strand 3	C	175	183	anti-parallel
Strand 4	C	157	160	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	103	106	first strand
Strand 2	C	115	119	anti-parallel
Strand 3	C	175	183	anti-parallel
Strand 4	C	163	165	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7E8T

Analysis of interatomic Contacts of Structural Units in PDB entry:
7E8T