Analysis of interatomic Contacts of Structural Units in PDB entry:
7E9T

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7E9T entry

There are 3 chains in PDB entry 7E9T (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 703	LEU 1234
B	ASN 703	LEU 1234
C	ASN 703	LEU 1234

There are 24 helices in PDB entry 7E9T. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	737	743	Right-handed alpha
Helix 2	AA2	A	746	755	Right-handed alpha
Helix 3	AA3	A	758	769	Right-handed alpha
Helix 4	AA4	A	913	1034	Right-handed alpha
Helix 5	AA5	A	1147	1154	Right-handed alpha
Helix 6	AA6	A	1168	1172	Right-handed 310
Helix 7	AA7	A	1181	1196	Right-handed alpha
Helix 8	AA8	A	1213	1234	Right-handed alpha
Helix 9	AA9	B	737	743	Right-handed alpha
Helix 10	AB1	B	746	755	Right-handed alpha
Helix 11	AB2	B	758	769	Right-handed alpha
Helix 12	AB3	B	913	1034	Right-handed alpha
Helix 13	AB4	B	1147	1154	Right-handed alpha
Helix 14	AB5	B	1168	1172	Right-handed 310
Helix 15	AB6	B	1181	1196	Right-handed alpha
Helix 16	AB7	B	1213	1234	Right-handed alpha
Helix 17	AB8	C	737	743	Right-handed alpha
Helix 18	AB9	C	746	755	Right-handed alpha
Helix 19	AC1	C	758	769	Right-handed alpha
Helix 20	AC2	C	913	1034	Right-handed alpha
Helix 21	AC3	C	1147	1154	Right-handed alpha
Helix 22	AC4	C	1168	1172	Right-handed 310
Helix 23	AC5	C	1181	1196	Right-handed alpha
Helix 24	AC6	C	1213	1234	Right-handed alpha

There are 9 sheets in PDB entry 7E9T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	710	715	first strand
Strand 2	A	1072	1078	anti-parallel
Strand 3	A	1094	1097	anti-parallel
Strand 4	A	1102	1105	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1047	1056	first strand
Strand 2	A	1059	1068	anti-parallel
Strand 3	A	719	728	anti-parallel
Strand 4	B	1129	1134	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1081	1083	first strand
Strand 2	A	1086	1090	anti-parallel
Strand 3	A	1120	1122	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1129	1134	first strand
Strand 2	C	719	728	parallel
Strand 3	C	1059	1068	anti-parallel
Strand 4	C	1047	1056	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	710	715	first strand
Strand 2	B	1072	1078	anti-parallel
Strand 3	B	1094	1097	anti-parallel
Strand 4	B	1102	1105	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1047	1056	first strand
Strand 2	B	1059	1068	anti-parallel
Strand 3	B	719	728	anti-parallel
Strand 4	C	1129	1134	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1081	1083	first strand
Strand 2	B	1086	1090	anti-parallel
Strand 3	B	1120	1122	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	710	715	first strand
Strand 2	C	1072	1078	anti-parallel
Strand 3	C	1094	1097	anti-parallel
Strand 4	C	1102	1105	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1081	1083	first strand
Strand 2	C	1086	1090	anti-parallel
Strand 3	C	1120	1122	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7E9T

Analysis of interatomic Contacts of Structural Units in PDB entry:
7E9T