Analysis of interatomic Contacts of Structural Units in PDB entry:
7E9U

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7E9U entry

There are 2 chains in PDB entry 7E9U (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 71	LEU 622
B	SER 71	LEU 622

There are 57 helices in PDB entry 7E9U. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	78	95	Right-handed alpha
Helix 2	AA2	A	103	108	Right-handed alpha
Helix 3	AA3	A	116	128	Right-handed alpha
Helix 4	AA4	A	137	148	Right-handed alpha
Helix 5	AA5	A	177	194	Right-handed alpha
Helix 6	AA6	A	199	205	Right-handed alpha
Helix 7	AA7	A	206	209	Right-handed 310
Helix 8	AA8	A	231	243	Right-handed alpha
Helix 9	AA9	A	245	264	Right-handed alpha
Helix 10	AB1	A	271	275	Right-handed 310
Helix 11	AB2	A	282	295	Right-handed alpha
Helix 12	AB3	A	296	315	Right-handed alpha
Helix 13	AB4	A	316	318	Right-handed 310
Helix 14	AB5	A	344	346	Right-handed 310
Helix 15	AB6	A	347	355	Right-handed alpha
Helix 16	AB7	A	356	358	Right-handed 310
Helix 17	AB8	A	360	377	Right-handed alpha
Helix 18	AB9	A	382	386	Right-handed 310
Helix 19	AC1	A	391	395	Right-handed 310
Helix 20	AC2	A	396	398	Right-handed 310
Helix 21	AC3	A	402	423	Right-handed alpha
Helix 22	AC4	A	425	447	Right-handed alpha
Helix 23	AC5	A	471	475	Right-handed 310
Helix 24	AC6	A	480	488	Right-handed 310
Helix 25	AC7	A	489	494	Right-handed alpha
Helix 26	AC8	A	495	510	Right-handed alpha
Helix 27	AC9	A	534	548	Right-handed alpha
Helix 28	AD1	A	550	576	Right-handed alpha
Helix 29	AD2	A	602	617	Right-handed alpha
Helix 30	AD3	B	78	93	Right-handed alpha
Helix 31	AD4	B	103	108	Right-handed alpha
Helix 32	AD5	B	116	128	Right-handed alpha
Helix 33	AD6	B	137	148	Right-handed alpha
Helix 34	AD7	B	177	194	Right-handed alpha
Helix 35	AD8	B	199	205	Right-handed alpha
Helix 36	AD9	B	206	209	Right-handed 310
Helix 37	AE1	B	231	243	Right-handed alpha
Helix 38	AE2	B	245	264	Right-handed alpha
Helix 39	AE3	B	271	275	Right-handed 310
Helix 40	AE4	B	282	295	Right-handed alpha
Helix 41	AE5	B	296	315	Right-handed alpha
Helix 42	AE6	B	316	318	Right-handed 310
Helix 43	AE7	B	344	346	Right-handed 310
Helix 44	AE8	B	347	355	Right-handed alpha
Helix 45	AE9	B	360	377	Right-handed alpha
Helix 46	AF1	B	382	386	Right-handed 310
Helix 47	AF2	B	391	395	Right-handed 310
Helix 48	AF3	B	396	398	Right-handed 310
Helix 49	AF4	B	402	423	Right-handed alpha
Helix 50	AF5	B	425	446	Right-handed alpha
Helix 51	AF6	B	471	475	Right-handed 310
Helix 52	AF7	B	480	488	Right-handed 310
Helix 53	AF8	B	489	494	Right-handed alpha
Helix 54	AF9	B	495	510	Right-handed alpha
Helix 55	AG1	B	534	548	Right-handed alpha
Helix 56	AG2	B	550	576	Right-handed alpha
Helix 57	AG3	B	602	617	Right-handed alpha

There are 14 sheets in PDB entry 7E9U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	110	111	first strand
Strand 2	A	149	150	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	156	158	first strand
Strand 2	A	195	198	anti-parallel
Strand 3	A	218	219	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	320	323	first strand
Strand 2	A	331	334	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	400	401	first strand
Strand 2	A	458	459	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	448	449	first strand
Strand 2	A	454	455	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	512	513	first strand
Strand 2	A	516	517	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	532	533	first strand
Strand 2	A	582	583	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	110	111	first strand
Strand 2	B	149	150	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	156	158	first strand
Strand 2	B	195	198	anti-parallel
Strand 3	B	218	219	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	320	324	first strand
Strand 2	B	330	334	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	400	401	first strand
Strand 2	B	458	459	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	448	449	first strand
Strand 2	B	454	455	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	512	513	first strand
Strand 2	B	516	517	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	532	533	first strand
Strand 2	B	582	583	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7E9U

Analysis of interatomic Contacts of Structural Units in PDB entry:
7E9U