Analysis of interatomic Contacts of Structural Units in PDB entry:
7E9W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7E9W entry

There are 4 chains in PDB entry 7E9W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 290
B
 MET 1HIS 290
C
 MET 1HIS 290
D
 MET 1HIS 290
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 52 helices in PDB entry 7E9W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 10Right-handed 310
Helix 2
AA2
A
17 29Right-handed alpha
Helix 3
AA3
A
39 43Right-handed 310
Helix 4
AA4
A
44 58Right-handed alpha
Helix 5
AA5
A
69 73Right-handed 310
Helix 6
AA6
A
78 100Right-handed alpha
Helix 7
AA7
A
121 143Right-handed alpha
Helix 8
AA8
A
162 174Right-handed alpha
Helix 9
AA9
A
184 191Right-handed alpha
Helix 10
AB1
A
193 202Right-handed alpha
Helix 11
AB2
A
224 235Right-handed alpha
Helix 12
AB3
A
250 258Right-handed alpha
Helix 13
AB4
A
268 288Right-handed alpha
Helix 14
AB5
B
8 11Right-handed 310
Helix 15
AB6
B
17 29Right-handed alpha
Helix 16
AB7
B
39 43Right-handed 310
Helix 17
AB8
B
44 58Right-handed alpha
Helix 18
AB9
B
69 73Right-handed 310
Helix 19
AC1
B
78 100Right-handed alpha
Helix 20
AC2
B
121 143Right-handed alpha
Helix 21
AC3
B
162 174Right-handed alpha
Helix 22
AC4
B
184 191Right-handed alpha
Helix 23
AC5
B
193 202Right-handed alpha
Helix 24
AC6
B
224 236Right-handed alpha
Helix 25
AC7
B
250 258Right-handed alpha
Helix 26
AC8
B
268 288Right-handed alpha
Helix 27
AC9
C
8 10Right-handed 310
Helix 28
AD1
C
17 29Right-handed alpha
Helix 29
AD2
C
39 43Right-handed 310
Helix 30
AD3
C
44 58Right-handed alpha
Helix 31
AD4
C
69 73Right-handed 310
Helix 32
AD5
C
78 100Right-handed alpha
Helix 33
AD6
C
121 143Right-handed alpha
Helix 34
AD7
C
162 174Right-handed alpha
Helix 35
AD8
C
184 191Right-handed alpha
Helix 36
AD9
C
193 202Right-handed alpha
Helix 37
AE1
C
224 235Right-handed alpha
Helix 38
AE2
C
250 257Right-handed alpha
Helix 39
AE3
C
268 288Right-handed alpha
Helix 40
AE4
D
8 10Right-handed 310
Helix 41
AE5
D
17 29Right-handed alpha
Helix 42
AE6
D
39 43Right-handed 310
Helix 43
AE7
D
44 58Right-handed alpha
Helix 44
AE8
D
69 73Right-handed 310
Helix 45
AE9
D
78 100Right-handed alpha
Helix 46
AF1
D
121 143Right-handed alpha
Helix 47
AF2
D
162 174Right-handed alpha
Helix 48
AF3
D
184 191Right-handed alpha
Helix 49
AF4
D
193 202Right-handed alpha
Helix 50
AF5
D
224 235Right-handed alpha
Helix 51
AF6
D
250 258Right-handed alpha
Helix 52
AF7
D
268 288Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 7E9W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 6first strand
Strand 2
A
32 36parallel
Strand 3
A
61 65parallel
Strand 4
A
103 106parallel
Strand 5
A
146 150parallel
Strand 6
A
178 183parallel
Strand 7
A
205 210parallel
Strand 8
A
241 243parallel
Strand 9
A
3 6parallel
Back to list of sheets
Back to top of page

There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 6first strand
Strand 2
B
32 36parallel
Strand 3
B
61 65parallel
Strand 4
B
103 106parallel
Strand 5
B
146 150parallel
Strand 6
B
178 183parallel
Strand 7
B
205 210parallel
Strand 8
B
241 243parallel
Strand 9
B
3 6parallel
Back to list of sheets
Back to top of page

There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 6first strand
Strand 2
C
32 36parallel
Strand 3
C
61 65parallel
Strand 4
C
103 106parallel
Strand 5
C
146 150parallel
Strand 6
C
178 183parallel
Strand 7
C
205 210parallel
Strand 8
C
241 243parallel
Strand 9
C
3 6parallel
Back to list of sheets
Back to top of page

There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 6first strand
Strand 2
D
32 36parallel
Strand 3
D
61 65parallel
Strand 4
D
103 106parallel
Strand 5
D
146 150parallel
Strand 6
D
178 183parallel
Strand 7
D
205 210parallel
Strand 8
D
241 243parallel
Strand 9
D
3 6parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il