Analysis of interatomic Contacts of Structural Units in PDB entry:
7EAL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7EAL entry

There are 6 chains in PDB entry 7EAL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 176
B
 LYS 452ASP 513
C
 GLN 453ASP 513
D
 MET 1GLY 176
E
 LEU 449ASP 513
F
 ALA 446PHE 511
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 15 helices in PDB entry 7EAL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 35Right-handed alpha
Helix 2
AA2
A
37 39Right-handed 310
Helix 3
AA3
A
56 60Right-handed 310
Helix 4
AA4
A
122 135Right-handed alpha
Helix 5
AA5
A
137 139Right-handed 310
Helix 6
AA6
B
454 511Right-handed alpha
Helix 7
AA7
C
454 510Right-handed alpha
Helix 8
AA8
D
22 35Right-handed alpha
Helix 9
AA9
D
37 39Right-handed 310
Helix 10
AB1
D
56 60Right-handed 310
Helix 11
AB2
D
122 135Right-handed alpha
Helix 12
AB3
D
137 139Right-handed 310
Helix 13
AB4
D
156 160Right-handed 310
Helix 14
AB5
E
451 513Right-handed alpha
Helix 15
AB6
F
447 511Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 7EAL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 16first strand
Strand 2
A
2 7anti-parallel
Strand 3
A
66 71parallel
Strand 4
A
41 45anti-parallel
Strand 5
A
48 49anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 116first strand
Strand 2
A
102 106anti-parallel
Strand 3
A
166 171parallel
Strand 4
A
141 145anti-parallel
Strand 5
A
148 149anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
12 16first strand
Strand 2
D
2 7anti-parallel
Strand 3
D
66 71parallel
Strand 4
D
41 45anti-parallel
Strand 5
D
48 49anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
112 117first strand
Strand 2
D
101 107anti-parallel
Strand 3
D
166 171parallel
Strand 4
D
141 145anti-parallel
Strand 5
D
148 149anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il