Analysis of interatomic Contacts of Structural Units in PDB entry:
7EAV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7EAV entry

There are 2 chains in PDB entry 7EAV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE 4	LEU 718
B	PHE 5	LEU 718

There are 47 helices in PDB entry 7EAV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	10	Right-handed 310
Helix 2	AA2	A	142	146	Right-handed 310
Helix 3	AA3	A	180	186	Right-handed alpha
Helix 4	AA4	A	198	203	Right-handed alpha
Helix 5	AA5	A	204	215	Right-handed alpha
Helix 6	AA6	A	230	235	Right-handed alpha
Helix 7	AA7	A	253	257	Right-handed 310
Helix 8	AA8	A	263	278	Right-handed alpha
Helix 9	AA9	A	303	309	Right-handed alpha
Helix 10	AB1	A	337	354	Right-handed alpha
Helix 11	AB2	A	364	369	Right-handed 310
Helix 12	AB3	A	379	388	Right-handed alpha
Helix 13	AB4	A	390	394	Right-handed 310
Helix 14	AB5	A	421	434	Right-handed alpha
Helix 15	AB6	A	439	447	Right-handed alpha
Helix 16	AB7	A	449	454	Right-handed alpha
Helix 17	AB8	A	455	457	Right-handed 310
Helix 18	AB9	A	459	461	Right-handed 310
Helix 19	AC1	A	474	479	Right-handed alpha
Helix 20	AC2	A	486	490	Right-handed 310
Helix 21	AC3	A	513	532	Right-handed alpha
Helix 22	AC4	A	543	547	Right-handed 310
Helix 23	AC5	A	571	591	Right-handed alpha
Helix 24	AC6	A	624	630	Right-handed alpha
Helix 25	AC7	A	642	644	Right-handed 310
Helix 26	AC8	B	93	96	Right-handed 310
Helix 27	AC9	B	132	136	Right-handed 310
Helix 28	AD1	B	170	174	Right-handed 310
Helix 29	AD2	B	180	186	Right-handed alpha
Helix 30	AD3	B	198	203	Right-handed alpha
Helix 31	AD4	B	204	215	Right-handed alpha
Helix 32	AD5	B	230	235	Right-handed alpha
Helix 33	AD6	B	263	278	Right-handed alpha
Helix 34	AD7	B	303	313	Right-handed alpha
Helix 35	AD8	B	337	354	Right-handed alpha
Helix 36	AD9	B	364	368	Right-handed 310
Helix 37	AE1	B	379	388	Right-handed alpha
Helix 38	AE2	B	421	434	Right-handed alpha
Helix 39	AE3	B	439	447	Right-handed alpha
Helix 40	AE4	B	449	454	Right-handed alpha
Helix 41	AE5	B	459	461	Right-handed 310
Helix 42	AE6	B	474	479	Right-handed alpha
Helix 43	AE7	B	485	490	Right-handed 310
Helix 44	AE8	B	513	532	Right-handed alpha
Helix 45	AE9	B	543	547	Right-handed 310
Helix 46	AF1	B	571	591	Right-handed alpha
Helix 47	AF2	B	641	644	Right-handed 310

There are 15 sheets in PDB entry 7EAV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	24	25	first strand
Strand 2	A	30	36	anti-parallel
Strand 3	A	69	75	anti-parallel
Strand 4	A	64	65	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	61	first strand
Strand 2	A	42	48	anti-parallel
Strand 3	A	82	88	anti-parallel
Strand 4	A	149	150	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	91	92	first strand
Strand 2	A	97	98	anti-parallel

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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	176	179	first strand
Strand 2	A	218	221	parallel
Strand 3	A	282	287	parallel
Strand 4	A	359	362	parallel
Strand 5	A	395	398	parallel
Strand 6	A	417	420	parallel
Strand 7	A	463	465	parallel
Strand 8	A	537	541	parallel
Strand 9	A	176	179	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	437	438	first strand
Strand 2	A	631	632	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	613	616	first strand
Strand 2	A	634	640	anti-parallel
Strand 3	A	658	664	anti-parallel
Strand 4	A	709	717	anti-parallel
Strand 5	A	678	684	anti-parallel
Strand 6	A	696	698	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	670	673	first strand
Strand 2	A	702	705	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	23	25	first strand
Strand 2	B	30	36	anti-parallel
Strand 3	B	69	75	anti-parallel
Strand 4	B	64	65	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	62	first strand
Strand 2	B	42	48	anti-parallel
Strand 3	B	82	88	anti-parallel
Strand 4	B	148	150	anti-parallel
Strand 5	B	113	114	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	91	92	first strand
Strand 2	B	97	98	anti-parallel

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There are 9 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	176	179	first strand
Strand 2	B	218	221	parallel
Strand 3	B	282	287	parallel
Strand 4	B	359	362	parallel
Strand 5	B	395	398	parallel
Strand 6	B	417	420	parallel
Strand 7	B	463	465	parallel
Strand 8	B	537	541	parallel
Strand 9	B	176	179	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	370	371	first strand
Strand 2	B	374	375	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	437	438	first strand
Strand 2	B	631	632	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	613	616	first strand
Strand 2	B	634	639	anti-parallel
Strand 3	B	659	664	anti-parallel
Strand 4	B	709	717	anti-parallel
Strand 5	B	678	684	anti-parallel
Strand 6	B	696	698	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	670	673	first strand
Strand 2	B	702	705	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7EAV

Analysis of interatomic Contacts of Structural Units in PDB entry:
7EAV