Analysis of interatomic Contacts of Structural Units in PDB entry:
7EBE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7EBE entry

There are 8 chains in PDB entry 7EBE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	LYS 544
B	PRO 2	ASP 541
C	PRO 2	LYS 544
D	PRO 2	LYS 544
E	PRO 2	LYS 544
F	PRO 2	LYS 544
G	THR 4	PHE 543
H	THR 4	GLY 537

There are222 helices in PDB entry 7EBE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	7	27	Right-handed alpha
Helix 2	AA2	A	28	32	Right-handed 310
Helix 3	AA3	A	39	45	Right-handed alpha
Helix 4	AA4	A	55	73	Right-handed alpha
Helix 5	AA5	A	84	92	Right-handed alpha
Helix 6	AA6	A	101	109	Right-handed alpha
Helix 7	AA7	A	125	151	Right-handed alpha
Helix 8	AA8	A	153	158	Right-handed alpha
Helix 9	AA9	A	179	193	Right-handed alpha
Helix 10	AB1	A	220	239	Right-handed alpha
Helix 11	AB2	A	261	268	Right-handed 310
Helix 12	AB3	A	278	288	Right-handed alpha
Helix 13	AB4	A	292	308	Right-handed alpha
Helix 14	AB5	A	311	322	Right-handed alpha
Helix 15	AB6	A	327	339	Right-handed alpha
Helix 16	AB7	A	346	359	Right-handed alpha
Helix 17	AB8	A	381	393	Right-handed alpha
Helix 18	AB9	A	394	396	Right-handed 310
Helix 19	AC1	A	407	420	Right-handed alpha
Helix 20	AC2	A	436	441	Right-handed alpha
Helix 21	AC3	A	442	457	Right-handed alpha
Helix 22	AC4	A	465	486	Right-handed alpha
Helix 23	AC5	A	487	494	Right-handed alpha
Helix 24	AC6	A	494	501	Right-handed alpha
Helix 25	AC7	A	503	506	Right-handed 310
Helix 26	AC8	A	507	513	Right-handed alpha
Helix 27	AC9	A	513	525	Right-handed alpha
Helix 28	AD1	A	540	544	Right-handed 310
Helix 29	AD2	B	7	27	Right-handed alpha
Helix 30	AD3	B	28	32	Right-handed 310
Helix 31	AD4	B	39	45	Right-handed alpha
Helix 32	AD5	B	55	73	Right-handed alpha
Helix 33	AD6	B	84	92	Right-handed alpha
Helix 34	AD7	B	101	109	Right-handed alpha
Helix 35	AD8	B	125	151	Right-handed alpha
Helix 36	AD9	B	153	158	Right-handed alpha
Helix 37	AE1	B	179	193	Right-handed alpha
Helix 38	AE2	B	220	239	Right-handed alpha
Helix 39	AE3	B	261	268	Right-handed 310
Helix 40	AE4	B	278	288	Right-handed alpha
Helix 41	AE5	B	292	308	Right-handed alpha
Helix 42	AE6	B	311	322	Right-handed alpha
Helix 43	AE7	B	327	339	Right-handed alpha
Helix 44	AE8	B	346	359	Right-handed alpha
Helix 45	AE9	B	381	393	Right-handed alpha
Helix 46	AF1	B	394	396	Right-handed 310
Helix 47	AF2	B	407	420	Right-handed alpha
Helix 48	AF3	B	436	441	Right-handed alpha
Helix 49	AF4	B	442	457	Right-handed alpha
Helix 50	AF5	B	465	486	Right-handed alpha
Helix 51	AF6	B	487	494	Right-handed alpha
Helix 52	AF7	B	494	501	Right-handed alpha
Helix 53	AF8	B	503	506	Right-handed 310
Helix 54	AF9	B	507	513	Right-handed alpha
Helix 55	AG1	B	513	525	Right-handed alpha
Helix 56	AG2	C	7	27	Right-handed alpha
Helix 57	AG3	C	28	32	Right-handed 310
Helix 58	AG4	C	39	45	Right-handed alpha
Helix 59	AG5	C	55	73	Right-handed alpha
Helix 60	AG6	C	84	92	Right-handed alpha
Helix 61	AG7	C	101	109	Right-handed alpha
Helix 62	AG8	C	125	151	Right-handed alpha
Helix 63	AG9	C	153	158	Right-handed alpha
Helix 64	AH1	C	179	193	Right-handed alpha
Helix 65	AH2	C	220	239	Right-handed alpha
Helix 66	AH3	C	261	268	Right-handed 310
Helix 67	AH4	C	278	288	Right-handed alpha
Helix 68	AH5	C	298	308	Right-handed alpha
Helix 69	AH6	C	311	322	Right-handed alpha
Helix 70	AH7	C	327	339	Right-handed alpha
Helix 71	AH8	C	346	359	Right-handed alpha
Helix 72	AH9	C	381	393	Right-handed alpha
Helix 73	AI1	C	394	396	Right-handed 310
Helix 74	AI2	C	407	420	Right-handed alpha
Helix 75	AI3	C	436	441	Right-handed alpha
Helix 76	AI4	C	442	457	Right-handed alpha
Helix 77	AI5	C	465	486	Right-handed alpha
Helix 78	AI6	C	487	494	Right-handed alpha
Helix 79	AI7	C	494	501	Right-handed alpha
Helix 80	AI8	C	503	506	Right-handed 310
Helix 81	AI9	C	507	513	Right-handed alpha
Helix 82	AJ1	C	513	525	Right-handed alpha
Helix 83	AJ2	C	540	544	Right-handed 310
Helix 84	AJ3	D	7	27	Right-handed alpha
Helix 85	AJ4	D	28	32	Right-handed 310
Helix 86	AJ5	D	39	45	Right-handed alpha
Helix 87	AJ6	D	55	74	Right-handed alpha
Helix 88	AJ7	D	84	92	Right-handed alpha
Helix 89	AJ8	D	101	109	Right-handed alpha
Helix 90	AJ9	D	125	151	Right-handed alpha
Helix 91	AK1	D	153	158	Right-handed alpha
Helix 92	AK2	D	179	193	Right-handed alpha
Helix 93	AK3	D	204	208	Right-handed 310
Helix 94	AK4	D	220	239	Right-handed alpha
Helix 95	AK5	D	261	268	Right-handed 310
Helix 96	AK6	D	278	288	Right-handed alpha
Helix 97	AK7	D	295	308	Right-handed alpha
Helix 98	AK8	D	311	322	Right-handed alpha
Helix 99	AK9	D	327	339	Right-handed alpha
Helix 100	AL1	D	346	359	Right-handed alpha
Helix 101	AL2	D	381	393	Right-handed alpha
Helix 102	AL3	D	394	396	Right-handed 310
Helix 103	AL4	D	407	420	Right-handed alpha
Helix 104	AL5	D	436	441	Right-handed alpha
Helix 105	AL6	D	442	457	Right-handed alpha
Helix 106	AL7	D	465	486	Right-handed alpha
Helix 107	AL8	D	487	494	Right-handed alpha
Helix 108	AL9	D	494	501	Right-handed alpha
Helix 109	AM1	D	503	506	Right-handed 310
Helix 110	AM2	D	507	513	Right-handed alpha
Helix 111	AM3	D	513	525	Right-handed alpha
Helix 112	AM4	D	540	544	Right-handed 310
Helix 113	AM5	E	7	27	Right-handed alpha
Helix 114	AM6	E	28	32	Right-handed 310
Helix 115	AM7	E	39	45	Right-handed alpha
Helix 116	AM8	E	55	74	Right-handed alpha
Helix 117	AM9	E	84	92	Right-handed alpha
Helix 118	AN1	E	101	109	Right-handed alpha
Helix 119	AN2	E	125	151	Right-handed alpha
Helix 120	AN3	E	153	158	Right-handed alpha
Helix 121	AN4	E	179	194	Right-handed alpha
Helix 122	AN5	E	220	239	Right-handed alpha
Helix 123	AN6	E	261	268	Right-handed 310
Helix 124	AN7	E	278	288	Right-handed alpha
Helix 125	AN8	E	292	308	Right-handed alpha
Helix 126	AN9	E	311	321	Right-handed alpha
Helix 127	AO1	E	327	339	Right-handed alpha
Helix 128	AO2	E	346	358	Right-handed alpha
Helix 129	AO3	E	381	393	Right-handed alpha
Helix 130	AO4	E	394	396	Right-handed 310
Helix 131	AO5	E	407	420	Right-handed alpha
Helix 132	AO6	E	442	457	Right-handed alpha
Helix 133	AO7	E	465	486	Right-handed alpha
Helix 134	AO8	E	487	494	Right-handed alpha
Helix 135	AO9	E	494	501	Right-handed alpha
Helix 136	AP1	E	503	506	Right-handed 310
Helix 137	AP2	E	507	513	Right-handed alpha
Helix 138	AP3	E	513	525	Right-handed alpha
Helix 139	AP4	E	540	544	Right-handed 310
Helix 140	AP5	F	7	27	Right-handed alpha
Helix 141	AP6	F	28	32	Right-handed 310
Helix 142	AP7	F	39	45	Right-handed alpha
Helix 143	AP8	F	55	73	Right-handed alpha
Helix 144	AP9	F	84	92	Right-handed alpha
Helix 145	AQ1	F	101	109	Right-handed alpha
Helix 146	AQ2	F	125	151	Right-handed alpha
Helix 147	AQ3	F	153	158	Right-handed alpha
Helix 148	AQ4	F	179	193	Right-handed alpha
Helix 149	AQ5	F	220	239	Right-handed alpha
Helix 150	AQ6	F	261	268	Right-handed 310
Helix 151	AQ7	F	278	288	Right-handed alpha
Helix 152	AQ8	F	292	308	Right-handed alpha
Helix 153	AQ9	F	311	322	Right-handed alpha
Helix 154	AR1	F	327	339	Right-handed alpha
Helix 155	AR2	F	346	359	Right-handed alpha
Helix 156	AR3	F	381	393	Right-handed alpha
Helix 157	AR4	F	394	396	Right-handed 310
Helix 158	AR5	F	407	420	Right-handed alpha
Helix 159	AR6	F	436	441	Right-handed alpha
Helix 160	AR7	F	442	457	Right-handed alpha
Helix 161	AR8	F	465	486	Right-handed alpha
Helix 162	AR9	F	487	494	Right-handed alpha
Helix 163	AS1	F	494	501	Right-handed alpha
Helix 164	AS2	F	503	506	Right-handed 310
Helix 165	AS3	F	507	513	Right-handed alpha
Helix 166	AS4	F	513	525	Right-handed alpha
Helix 167	AS5	F	540	544	Right-handed 310
Helix 168	AS6	G	7	27	Right-handed alpha
Helix 169	AS7	G	28	32	Right-handed 310
Helix 170	AS8	G	39	45	Right-handed alpha
Helix 171	AS9	G	55	73	Right-handed alpha
Helix 172	AT1	G	84	92	Right-handed alpha
Helix 173	AT2	G	101	109	Right-handed alpha
Helix 174	AT3	G	125	151	Right-handed alpha
Helix 175	AT4	G	153	158	Right-handed alpha
Helix 176	AT5	G	179	193	Right-handed alpha
Helix 177	AT6	G	220	239	Right-handed alpha
Helix 178	AT7	G	261	268	Right-handed 310
Helix 179	AT8	G	278	288	Right-handed alpha
Helix 180	AT9	G	297	308	Right-handed alpha
Helix 181	AU1	G	311	321	Right-handed alpha
Helix 182	AU2	G	327	339	Right-handed alpha
Helix 183	AU3	G	346	359	Right-handed alpha
Helix 184	AU4	G	381	393	Right-handed alpha
Helix 185	AU5	G	394	396	Right-handed 310
Helix 186	AU6	G	407	420	Right-handed alpha
Helix 187	AU7	G	436	441	Right-handed alpha
Helix 188	AU8	G	442	457	Right-handed alpha
Helix 189	AU9	G	465	486	Right-handed alpha
Helix 190	AV1	G	487	494	Right-handed alpha
Helix 191	AV2	G	494	501	Right-handed alpha
Helix 192	AV3	G	503	506	Right-handed 310
Helix 193	AV4	G	507	513	Right-handed alpha
Helix 194	AV5	G	513	525	Right-handed alpha
Helix 195	AV6	H	7	27	Right-handed alpha
Helix 196	AV7	H	28	32	Right-handed 310
Helix 197	AV8	H	39	45	Right-handed alpha
Helix 198	AV9	H	55	74	Right-handed alpha
Helix 199	AW1	H	84	92	Right-handed alpha
Helix 200	AW2	H	101	109	Right-handed alpha
Helix 201	AW3	H	125	151	Right-handed alpha
Helix 202	AW4	H	153	158	Right-handed alpha
Helix 203	AW5	H	179	193	Right-handed alpha
Helix 204	AW6	H	204	208	Right-handed 310
Helix 205	AW7	H	220	239	Right-handed alpha
Helix 206	AW8	H	261	268	Right-handed 310
Helix 207	AW9	H	278	288	Right-handed alpha
Helix 208	AX1	H	293	308	Right-handed alpha
Helix 209	AX2	H	311	322	Right-handed alpha
Helix 210	AX3	H	327	339	Right-handed alpha
Helix 211	AX4	H	346	358	Right-handed alpha
Helix 212	AX5	H	381	393	Right-handed alpha
Helix 213	AX6	H	394	396	Right-handed 310
Helix 214	AX7	H	407	420	Right-handed alpha
Helix 215	AX8	H	436	441	Right-handed alpha
Helix 216	AX9	H	442	457	Right-handed alpha
Helix 217	AY1	H	465	486	Right-handed alpha
Helix 218	AY2	H	487	494	Right-handed alpha
Helix 219	AY3	H	494	501	Right-handed alpha
Helix 220	AY4	H	503	506	Right-handed 310
Helix 221	AY5	H	507	513	Right-handed alpha
Helix 222	AY6	H	513	525	Right-handed alpha

There are 24 sheets in PDB entry 7EBE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	77	80	first strand
Strand 2	A	458	463	parallel
Strand 3	A	426	430	parallel
Strand 4	A	398	401	parallel
Strand 5	A	243	248	parallel
Strand 6	A	197	201	parallel
Strand 7	A	169	172	parallel
Strand 8	A	98	100	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	217	218	first strand
Strand 2	A	255	256	parallel
Strand 3	A	376	377	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	270	271	first strand
Strand 2	A	309	310	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	77	80	first strand
Strand 2	B	458	463	parallel
Strand 3	B	426	430	parallel
Strand 4	B	398	401	parallel
Strand 5	B	243	248	parallel
Strand 6	B	197	201	parallel
Strand 7	B	169	172	parallel
Strand 8	B	98	100	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	217	218	first strand
Strand 2	B	255	256	parallel
Strand 3	B	376	377	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	270	271	first strand
Strand 2	B	309	310	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	77	80	first strand
Strand 2	C	458	463	parallel
Strand 3	C	426	430	parallel
Strand 4	C	398	401	parallel
Strand 5	C	243	248	parallel
Strand 6	C	197	201	parallel
Strand 7	C	169	172	parallel
Strand 8	C	98	100	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	217	218	first strand
Strand 2	C	255	256	parallel
Strand 3	C	376	377	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	270	271	first strand
Strand 2	C	309	310	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	77	80	first strand
Strand 2	D	458	463	parallel
Strand 3	D	426	430	parallel
Strand 4	D	398	401	parallel
Strand 5	D	243	248	parallel
Strand 6	D	197	201	parallel
Strand 7	D	169	172	parallel
Strand 8	D	98	100	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	217	218	first strand
Strand 2	D	255	256	parallel
Strand 3	D	376	377	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	270	271	first strand
Strand 2	D	309	310	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	77	80	first strand
Strand 2	E	458	463	parallel
Strand 3	E	426	430	parallel
Strand 4	E	398	401	parallel
Strand 5	E	243	248	parallel
Strand 6	E	197	201	parallel
Strand 7	E	169	172	parallel
Strand 8	E	98	100	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	217	218	first strand
Strand 2	E	255	256	parallel
Strand 3	E	376	377	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	270	271	first strand
Strand 2	E	309	310	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	77	80	first strand
Strand 2	F	458	463	parallel
Strand 3	F	426	430	parallel
Strand 4	F	398	401	parallel
Strand 5	F	243	248	parallel
Strand 6	F	197	201	parallel
Strand 7	F	169	172	parallel
Strand 8	F	98	100	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	217	218	first strand
Strand 2	F	255	256	parallel
Strand 3	F	376	377	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	270	271	first strand
Strand 2	F	309	310	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	77	80	first strand
Strand 2	G	458	463	parallel
Strand 3	G	426	430	parallel
Strand 4	G	398	401	parallel
Strand 5	G	243	248	parallel
Strand 6	G	197	201	parallel
Strand 7	G	169	172	parallel
Strand 8	G	98	100	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	217	218	first strand
Strand 2	G	255	256	parallel
Strand 3	G	376	377	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	270	271	first strand
Strand 2	G	309	310	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	77	80	first strand
Strand 2	H	458	463	parallel
Strand 3	H	426	430	parallel
Strand 4	H	398	401	parallel
Strand 5	H	243	248	parallel
Strand 6	H	197	201	parallel
Strand 7	H	169	172	parallel
Strand 8	H	98	100	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	217	218	first strand
Strand 2	H	255	256	parallel
Strand 3	H	376	377	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	270	271	first strand
Strand 2	H	309	310	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7EBE

Analysis of interatomic Contacts of Structural Units in PDB entry:
7EBE