Analysis of interatomic Contacts of Structural Units in PDB entry:
7EBF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7EBF entry

There are 4 chains in PDB entry 7EBF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 8PHE 462
B
 ILE 8PHE 462
C
 ILE 8PHE 462
D
 ILE 8PHE 462
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 72 helices in PDB entry 7EBF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 26Right-handed alpha
Helix 2
AA2
A
28 32Right-handed 310
Helix 3
AA3
A
39 47Right-handed alpha
Helix 4
AA4
A
54 74Right-handed alpha
Helix 5
AA5
A
127 151Right-handed alpha
Helix 6
AA6
A
156 160Right-handed alpha
Helix 7
AA7
A
180 193Right-handed alpha
Helix 8
AA8
A
220 239Right-handed alpha
Helix 9
AA9
A
261 266Right-handed alpha
Helix 10
AB1
A
278 286Right-handed alpha
Helix 11
AB2
A
292 307Right-handed alpha
Helix 12
AB3
A
311 321Right-handed alpha
Helix 13
AB4
A
329 339Right-handed alpha
Helix 14
AB5
A
346 358Right-handed alpha
Helix 15
AB6
A
380 393Right-handed alpha
Helix 16
AB7
A
394 396Right-handed 310
Helix 17
AB8
A
407 422Right-handed alpha
Helix 18
AB9
A
445 457Right-handed alpha
Helix 19
AC1
B
9 26Right-handed alpha
Helix 20
AC2
B
28 32Right-handed 310
Helix 21
AC3
B
39 47Right-handed alpha
Helix 22
AC4
B
54 74Right-handed alpha
Helix 23
AC5
B
127 151Right-handed alpha
Helix 24
AC6
B
156 160Right-handed alpha
Helix 25
AC7
B
180 193Right-handed alpha
Helix 26
AC8
B
220 239Right-handed alpha
Helix 27
AC9
B
261 266Right-handed alpha
Helix 28
AD1
B
278 286Right-handed alpha
Helix 29
AD2
B
292 307Right-handed alpha
Helix 30
AD3
B
311 321Right-handed alpha
Helix 31
AD4
B
329 339Right-handed alpha
Helix 32
AD5
B
346 358Right-handed alpha
Helix 33
AD6
B
380 393Right-handed alpha
Helix 34
AD7
B
394 396Right-handed 310
Helix 35
AD8
B
407 422Right-handed alpha
Helix 36
AD9
B
445 457Right-handed alpha
Helix 37
AE1
C
9 26Right-handed alpha
Helix 38
AE2
C
28 32Right-handed 310
Helix 39
AE3
C
39 47Right-handed alpha
Helix 40
AE4
C
54 74Right-handed alpha
Helix 41
AE5
C
127 151Right-handed alpha
Helix 42
AE6
C
156 160Right-handed alpha
Helix 43
AE7
C
180 193Right-handed alpha
Helix 44
AE8
C
220 239Right-handed alpha
Helix 45
AE9
C
261 266Right-handed alpha
Helix 46
AF1
C
278 286Right-handed alpha
Helix 47
AF2
C
292 307Right-handed alpha
Helix 48
AF3
C
311 321Right-handed alpha
Helix 49
AF4
C
329 339Right-handed alpha
Helix 50
AF5
C
346 358Right-handed alpha
Helix 51
AF6
C
380 393Right-handed alpha
Helix 52
AF7
C
394 396Right-handed 310
Helix 53
AF8
C
407 422Right-handed alpha
Helix 54
AF9
C
445 457Right-handed alpha
Helix 55
AG1
D
9 26Right-handed alpha
Helix 56
AG2
D
28 32Right-handed 310
Helix 57
AG3
D
39 47Right-handed alpha
Helix 58
AG4
D
54 74Right-handed alpha
Helix 59
AG5
D
127 151Right-handed alpha
Helix 60
AG6
D
156 160Right-handed alpha
Helix 61
AG7
D
180 193Right-handed alpha
Helix 62
AG8
D
220 239Right-handed alpha
Helix 63
AG9
D
261 266Right-handed alpha
Helix 64
AH1
D
278 286Right-handed alpha
Helix 65
AH2
D
292 307Right-handed alpha
Helix 66
AH3
D
311 321Right-handed alpha
Helix 67
AH4
D
329 339Right-handed alpha
Helix 68
AH5
D
346 358Right-handed alpha
Helix 69
AH6
D
380 393Right-handed alpha
Helix 70
AH7
D
394 396Right-handed 310
Helix 71
AH8
D
407 422Right-handed alpha
Helix 72
AH9
D
445 457Right-handed alpha
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There are 12 sheets in PDB entry 7EBF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 78first strand
Strand 2
A
458 461parallel
Strand 3
A
426 431parallel
Strand 4
A
398 403parallel
Strand 5
A
243 248parallel
Strand 6
A
197 201parallel
Strand 7
A
169 172parallel
Strand 8
A
98 100parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 218first strand
Strand 2
A
253 256parallel
Strand 3
A
376 377anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 271first strand
Strand 2
A
309 310anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
77 78first strand
Strand 2
B
458 461parallel
Strand 3
B
426 431parallel
Strand 4
B
398 403parallel
Strand 5
B
243 248parallel
Strand 6
B
197 201parallel
Strand 7
B
169 172parallel
Strand 8
B
98 100parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
216 218first strand
Strand 2
B
253 256parallel
Strand 3
B
376 377anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
270 271first strand
Strand 2
B
309 310anti-parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 78first strand
Strand 2
C
458 461parallel
Strand 3
C
426 431parallel
Strand 4
C
398 403parallel
Strand 5
C
243 248parallel
Strand 6
C
197 201parallel
Strand 7
C
169 172parallel
Strand 8
C
98 100parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
216 218first strand
Strand 2
C
253 256parallel
Strand 3
C
376 377anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
270 271first strand
Strand 2
C
309 310anti-parallel
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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
77 78first strand
Strand 2
D
458 461parallel
Strand 3
D
426 431parallel
Strand 4
D
398 403parallel
Strand 5
D
243 248parallel
Strand 6
D
197 201parallel
Strand 7
D
169 172parallel
Strand 8
D
98 100parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
216 218first strand
Strand 2
D
253 256parallel
Strand 3
D
376 377anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
270 271first strand
Strand 2
D
309 310anti-parallel
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