Analysis of interatomic Contacts of Structural Units in PDB entry:
7EBK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7EBK entry

There are 2 chains in PDB entry 7EBK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 995ALA 1180
B
 ALA 1ARG 8
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 7EBK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1052 1056Right-handed 310
Helix 2
AA2
A
1069 1086Right-handed alpha
Helix 3
AA3
A
1087 1093Right-handed 310
Helix 4
AA4
A
1100 1107Right-handed alpha
Helix 5
AA5
A
1112 1120Right-handed alpha
Helix 6
AA6
A
1130 1149Right-handed alpha
Helix 7
AA7
A
1153 1174Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7EBK.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1017 1018first strand
Strand 2
A
1006 1010anti-parallel
Strand 3
B
3 6anti-parallel
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