Analysis of interatomic Contacts of Structural Units in PDB entry:
7EBO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7EBO entry

There are 2 chains in PDB entry 7EBO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 7TYR 248
B
 LYS 4ILE 247
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 7EBO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 30Right-handed 310
Helix 2
AA2
A
31 41Right-handed alpha
Helix 3
AA3
A
58 64Right-handed alpha
Helix 4
AA4
A
65 83Right-handed alpha
Helix 5
AA5
A
94 107Right-handed alpha
Helix 6
AA6
A
125 141Right-handed alpha
Helix 7
AA7
A
146 176Right-handed alpha
Helix 8
AA8
A
177 183Right-handed 310
Helix 9
AA9
A
198 209Right-handed alpha
Helix 10
AB1
A
232 248Right-handed alpha
Helix 11
AB2
B
27 30Right-handed 310
Helix 12
AB3
B
31 41Right-handed alpha
Helix 13
AB4
B
57 64Right-handed alpha
Helix 14
AB5
B
65 83Right-handed alpha
Helix 15
AB6
B
94 107Right-handed alpha
Helix 16
AB7
B
127 142Right-handed alpha
Helix 17
AB8
B
146 155Right-handed alpha
Helix 18
AB9
B
156 176Right-handed alpha
Helix 19
AC1
B
177 183Right-handed 310
Helix 20
AC2
B
201 209Right-handed alpha
Helix 21
AC3
B
232 247Right-handed alpha
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There are 2 sheets in PDB entry 7EBO. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 11first strand
Strand 2
A
44 47anti-parallel
Strand 3
A
16 21parallel
Strand 4
A
87 93parallel
Strand 5
A
112 116parallel
Strand 6
A
187 192parallel
Strand 7
A
215 220parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 11first strand
Strand 2
B
44 47anti-parallel
Strand 3
B
17 21parallel
Strand 4
B
88 93parallel
Strand 5
B
112 116parallel
Strand 6
B
187 192parallel
Strand 7
B
215 220parallel
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