Analysis of interatomic Contacts of Structural Units in PDB entry:
7EBX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7EBX entry

There is 1 chain in PDB entry 7EBX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 12LYS 267
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 7EBX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 27Right-handed alpha
Helix 2
AA2
A
28 30Right-handed 310
Helix 3
AA3
A
47 55Right-handed alpha
Helix 4
AA4
A
70 82Right-handed alpha
Helix 5
AA5
A
119 130Right-handed alpha
Helix 6
AA6
A
145 156Right-handed alpha
Helix 7
AA7
A
179 191Right-handed alpha
Helix 8
AA8
A
209 221Right-handed alpha
Helix 9
AA9
A
226 244Right-handed alpha
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There are 2 sheets in PDB entry 7EBX. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 90first strand
Strand 2
A
63 68parallel
Strand 3
A
38 42parallel
Strand 4
A
105 110parallel
Strand 5
A
131 142parallel
Strand 6
A
253 266anti-parallel
Strand 7
A
195 207anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 90first strand
Strand 2
A
63 68parallel
Strand 3
A
38 42parallel
Strand 4
A
105 110parallel
Strand 5
A
131 142parallel
Strand 6
A
253 266anti-parallel
Strand 7
A
247 248anti-parallel
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