Analysis of interatomic Contacts of Structural Units in PDB entry:
7ED6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ED6 entry

There are 2 chains in PDB entry 7ED6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR -4LEU 198
B
 GLU 3LEU 198
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 7ED6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 22Right-handed alpha
Helix 2
AA2
A
24 32Right-handed alpha
Helix 3
AA3
A
40 59Right-handed alpha
Helix 4
AA4
A
63 79Right-handed alpha
Helix 5
AA5
A
80 99Right-handed alpha
Helix 6
AA6
A
106 124Right-handed alpha
Helix 7
AA7
A
131 143Right-handed alpha
Helix 8
AA8
A
147 165Right-handed alpha
Helix 9
AA9
A
165 170Right-handed alpha
Helix 10
AB1
A
170 177Right-handed alpha
Helix 11
AB2
A
180 198Right-handed alpha
Helix 12
AB3
B
6 22Right-handed alpha
Helix 13
AB4
B
24 32Right-handed alpha
Helix 14
AB5
B
40 59Right-handed alpha
Helix 15
AB6
B
63 79Right-handed alpha
Helix 16
AB7
B
80 99Right-handed alpha
Helix 17
AB8
B
105 124Right-handed alpha
Helix 18
AB9
B
131 143Right-handed alpha
Helix 19
AC1
B
147 170Right-handed alpha
Helix 20
AC2
B
170 177Right-handed alpha
Helix 21
AC3
B
180 198Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7ED6.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 5first strand
Strand 2
A
104 105anti-parallel
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