Analysis of interatomic Contacts of Structural Units in PDB entry:
7EE2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7EE2 entry

There is 1 chain in PDB entry 7EE2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 5TYR 227
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 7EE2. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
29 33Right-handed 310
Helix 2
AA2
A
80 84Right-handed 310
Helix 3
AA3
A
180 191Right-handed alpha
Helix 4
AA4
A
194 198Right-handed 310
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There are 2 sheets in PDB entry 7EE2. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
7 9first strand
Strand 2
A
35 46anti-parallel
Strand 3
A
49 59anti-parallel
Strand 4
A
199 226anti-parallel
Strand 5
A
100 111anti-parallel
Strand 6
A
123 132anti-parallel
Strand 7
A
162 168parallel
Strand 8
A
150 159anti-parallel
Strand 9
A
140 147anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
16 18first strand
Strand 2
A
21 24anti-parallel
Strand 3
A
67 73anti-parallel
Strand 4
A
199 226anti-parallel
Strand 5
A
87 95anti-parallel
Strand 6
A
175 179anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il