Analysis of interatomic Contacts of Structural Units in PDB entry:
7EE5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7EE5 entry

There are 5 chains in PDB entry 7EE5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 22VAL 139
B
 ALA 22VAL 139
C
 ALA 22ASP 145
D
 ALA 22THR 140
E
 ALA 22ASN 141
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 7EE5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
81 96Right-handed alpha
Helix 2
AA2
A
110 117Right-handed alpha
Helix 3
AA3
B
81 96Right-handed alpha
Helix 4
AA4
B
110 117Right-handed alpha
Helix 5
AA5
C
81 96Right-handed alpha
Helix 6
AA6
C
110 117Right-handed alpha
Helix 7
AA7
D
81 96Right-handed alpha
Helix 8
AA8
D
110 117Right-handed alpha
Helix 9
AA9
E
81 96Right-handed alpha
Helix 10
AB1
E
110 117Right-handed alpha
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There are 3 sheets in PDB entry 7EE5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 19 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 134first strand
Strand 2
A
121 130anti-parallel
Strand 3
A
62 72parallel
Strand 4
A
48 59anti-parallel
Strand 5
A
29 45anti-parallel
Strand 6
B
121 127anti-parallel
Strand 7
B
68 72parallel
Strand 8
B
48 58anti-parallel
Strand 9
B
29 45anti-parallel
Strand 10
E
121 127anti-parallel
Strand 11
E
68 72parallel
Strand 12
E
48 58anti-parallel
Strand 13
E
29 45anti-parallel
Strand 14
C
121 127anti-parallel
Strand 15
C
99 104anti-parallel
Strand 16
C
29 45anti-parallel
Strand 17
D
121 127anti-parallel
Strand 18
D
99 104anti-parallel
Strand 19
D
29 33anti-parallel
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There are 26 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
29 33first strand
Strand 2
D
99 104anti-parallel
Strand 3
D
121 127anti-parallel
Strand 4
C
29 45anti-parallel
Strand 5
C
99 104anti-parallel
Strand 6
C
121 127anti-parallel
Strand 7
E
29 45anti-parallel
Strand 8
E
48 58anti-parallel
Strand 9
E
68 72anti-parallel
Strand 10
E
121 127parallel
Strand 11
B
29 45anti-parallel
Strand 12
B
48 58anti-parallel
Strand 13
B
68 72anti-parallel
Strand 14
B
121 127parallel
Strand 15
B
99 104anti-parallel
Strand 16
B
29 45anti-parallel
Strand 17
E
121 127anti-parallel
Strand 18
E
99 104anti-parallel
Strand 19
E
29 45anti-parallel
Strand 20
C
121 127anti-parallel
Strand 21
C
68 72parallel
Strand 22
C
48 58anti-parallel
Strand 23
C
29 45anti-parallel
Strand 24
D
121 127anti-parallel
Strand 25
D
99 104anti-parallel
Strand 26
D
29 33anti-parallel
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There are 26 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 134first strand
Strand 2
A
121 130anti-parallel
Strand 3
A
62 72parallel
Strand 4
A
48 59anti-parallel
Strand 5
A
29 45anti-parallel
Strand 6
B
121 127anti-parallel
Strand 7
B
99 104anti-parallel
Strand 8
B
29 45anti-parallel
Strand 9
E
121 127anti-parallel
Strand 10
E
99 104anti-parallel
Strand 11
E
29 45anti-parallel
Strand 12
C
121 127anti-parallel
Strand 13
C
68 72parallel
Strand 14
C
48 58anti-parallel
Strand 15
C
29 45anti-parallel
Strand 16
D
121 127anti-parallel
Strand 17
D
66 72parallel
Strand 18
D
48 57anti-parallel
Strand 19
D
35 45anti-parallel
Strand 20
A
121 130anti-parallel
Strand 21
A
99 104anti-parallel
Strand 22
A
29 45anti-parallel
Strand 23
A
48 59anti-parallel
Strand 24
A
62 72anti-parallel
Strand 25
A
121 130parallel
Strand 26
A
133 134anti-parallel
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