Analysis of interatomic Contacts of Structural Units in PDB entry:
7EEH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7EEH entry

There are 4 chains in PDB entry 7EEH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 8	LEU 309
B	MSE 7	LEU 309
C	MSE 7	LEU 309
D	ARG 8	PHE 308

There are 32 helices in PDB entry 7EEH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	11	32	Right-handed alpha
Helix 2	AA2	A	37	49	Right-handed alpha
Helix 3	AA3	A	51	59	Right-handed alpha
Helix 4	AA4	A	60	65	Right-handed 310
Helix 5	AA5	A	121	126	Right-handed alpha
Helix 6	AA6	A	127	142	Right-handed alpha
Helix 7	AA7	A	227	229	Right-handed 310
Helix 8	AA8	B	7	10	Right-handed 310
Helix 9	AA9	B	11	32	Right-handed alpha
Helix 10	AB1	B	37	49	Right-handed alpha
Helix 11	AB2	B	51	59	Right-handed alpha
Helix 12	AB3	B	60	65	Right-handed 310
Helix 13	AB4	B	121	126	Right-handed alpha
Helix 14	AB5	B	127	142	Right-handed alpha
Helix 15	AB6	B	222	226	Right-handed 310
Helix 16	AB7	B	227	229	Right-handed 310
Helix 17	AB8	C	7	10	Right-handed 310
Helix 18	AB9	C	11	32	Right-handed alpha
Helix 19	AC1	C	37	49	Right-handed alpha
Helix 20	AC2	C	51	58	Right-handed alpha
Helix 21	AC3	C	59	65	Right-handed 310
Helix 22	AC4	C	121	126	Right-handed alpha
Helix 23	AC5	C	127	142	Right-handed alpha
Helix 24	AC6	C	222	226	Right-handed 310
Helix 25	AC7	C	227	229	Right-handed 310
Helix 26	AC8	D	11	32	Right-handed alpha
Helix 27	AC9	D	37	49	Right-handed alpha
Helix 28	AD1	D	51	58	Right-handed alpha
Helix 29	AD2	D	59	65	Right-handed 310
Helix 30	AD3	D	121	126	Right-handed alpha
Helix 31	AD4	D	127	142	Right-handed alpha
Helix 32	AD5	D	227	229	Right-handed 310

There are 12 sheets in PDB entry 7EEH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	36	first strand
Strand 2	A	243	247	anti-parallel
Strand 3	A	190	199	anti-parallel
Strand 4	A	267	277	anti-parallel
Strand 5	A	158	170	anti-parallel
Strand 6	A	71	84	anti-parallel
Strand 7	A	66	68	anti-parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	36	first strand
Strand 2	A	243	247	anti-parallel
Strand 3	A	190	199	anti-parallel
Strand 4	A	267	277	anti-parallel
Strand 5	A	158	170	anti-parallel
Strand 6	A	71	84	anti-parallel
Strand 7	A	89	93	anti-parallel
Strand 8	A	304	306	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	231	236	first strand
Strand 2	A	209	213	anti-parallel
Strand 3	A	252	255	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	33	36	first strand
Strand 2	B	243	247	anti-parallel
Strand 3	B	190	199	anti-parallel
Strand 4	B	267	277	anti-parallel
Strand 5	B	158	170	anti-parallel
Strand 6	B	71	84	anti-parallel
Strand 7	B	66	68	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	33	36	first strand
Strand 2	B	243	247	anti-parallel
Strand 3	B	190	199	anti-parallel
Strand 4	B	267	277	anti-parallel
Strand 5	B	158	170	anti-parallel
Strand 6	B	71	84	anti-parallel
Strand 7	B	89	92	anti-parallel
Strand 8	B	304	306	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	231	236	first strand
Strand 2	B	209	213	anti-parallel
Strand 3	B	252	255	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	33	36	first strand
Strand 2	C	243	247	anti-parallel
Strand 3	C	190	199	anti-parallel
Strand 4	C	267	277	anti-parallel
Strand 5	C	158	170	anti-parallel
Strand 6	C	71	84	anti-parallel
Strand 7	C	66	68	anti-parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	33	36	first strand
Strand 2	C	243	247	anti-parallel
Strand 3	C	190	199	anti-parallel
Strand 4	C	267	277	anti-parallel
Strand 5	C	158	170	anti-parallel
Strand 6	C	71	84	anti-parallel
Strand 7	C	89	92	anti-parallel
Strand 8	C	304	306	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	231	236	first strand
Strand 2	C	209	213	anti-parallel
Strand 3	C	252	255	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	33	36	first strand
Strand 2	D	243	247	anti-parallel
Strand 3	D	190	199	anti-parallel
Strand 4	D	267	277	anti-parallel
Strand 5	D	158	170	anti-parallel
Strand 6	D	71	84	anti-parallel
Strand 7	D	66	68	anti-parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	33	36	first strand
Strand 2	D	243	247	anti-parallel
Strand 3	D	190	199	anti-parallel
Strand 4	D	267	277	anti-parallel
Strand 5	D	158	170	anti-parallel
Strand 6	D	71	84	anti-parallel
Strand 7	D	89	92	anti-parallel
Strand 8	D	304	306	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	231	236	first strand
Strand 2	D	209	213	anti-parallel
Strand 3	D	252	255	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7EEH

Analysis of interatomic Contacts of Structural Units in PDB entry:
7EEH