Analysis of interatomic Contacts of Structural Units in PDB entry:
7EEI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7EEI entry

There is 1 chain in PDB entry 7EEI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 215VAL 1990
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 7EEI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
215 228Right-handed alpha
Helix 2
AA2
A
231 239Right-handed alpha
Helix 3
AA3
A
243 253Right-handed alpha
Helix 4
AA4
A
256 280Right-handed alpha
Helix 5
AA5
A
286 311Right-handed alpha
Helix 6
AA6
A
342 348Right-handed alpha
Helix 7
AA7
A
359 372Right-handed alpha
Helix 8
AA8
A
381 391Right-handed alpha
Helix 9
AA9
A
433 439Right-handed alpha
Helix 10
AB1
A
447 457Right-handed alpha
Helix 11
AB2
A
469 473Right-handed 310
Helix 12
AB3
A
475 487Right-handed alpha
Helix 13
AB4
A
497 506Right-handed alpha
Helix 14
AB5
A
507 530Right-handed alpha
Helix 15
AB6
A
599 608Right-handed alpha
Helix 16
AB7
A
608 624Right-handed alpha
Helix 17
AB8
A
630 637Right-handed alpha
Helix 18
AB9
A
640 659Right-handed alpha
Helix 19
AC1
A
661 677Right-handed alpha
Helix 20
AC2
A
678 680Right-handed 310
Helix 21
AC3
A
687 695Right-handed 310
Helix 22
AC4
A
701 721Right-handed alpha
Helix 23
AC5
A
748 756Right-handed alpha
Helix 24
AC6
A
769 785Right-handed alpha
Helix 25
AC7
A
808 828Right-handed alpha
Helix 26
AC8
A
830 846Right-handed alpha
Helix 27
AC9
A
847 852Right-handed alpha
Helix 28
AD1
A
866 871Right-handed alpha
Helix 29
AD2
A
880 889Right-handed alpha
Helix 30
AD3
A
894 910Right-handed alpha
Helix 31
AD4
A
932 952Right-handed alpha
Helix 32
AD5
A
960 979Right-handed alpha
Helix 33
AD6
A
1001 1012Right-handed alpha
Helix 34
AD7
A
1013 1015Right-handed 310
Helix 35
AD8
A
1016 1029Right-handed alpha
Helix 36
AD9
A
1035 1044Right-handed alpha
Helix 37
AE1
A
1054 1063Right-handed alpha
Helix 38
AE2
A
1089 1116Right-handed alpha
Helix 39
AE3
A
1117 1121Right-handed 310
Helix 40
AE4
A
1147 1164Right-handed alpha
Helix 41
AE5
A
1202 1207Right-handed alpha
Helix 42
AE6
A
1219 1235Right-handed alpha
Helix 43
AE7
A
1238 1257Right-handed alpha
Helix 44
AE8
A
1263 1275Right-handed alpha
Helix 45
AE9
A
1277 1281Right-handed 310
Helix 46
AF1
A
1295 1307Right-handed alpha
Helix 47
AF2
A
1308 1316Right-handed alpha
Helix 48
AF3
A
1358 1368Right-handed alpha
Helix 49
AF4
A
1374 1380Right-handed alpha
Helix 50
AF5
A
1381 1384Right-handed 310
Helix 51
AF6
A
1391 1404Right-handed alpha
Helix 52
AF7
A
1409 1414Right-handed alpha
Helix 53
AF8
A
1416 1427Right-handed alpha
Helix 54
AF9
A
1449 1457Right-handed alpha
Helix 55
AG1
A
1459 1469Right-handed alpha
Helix 56
AG2
A
1492 1496Right-handed 310
Helix 57
AG3
A
1506 1510Right-handed 310
Helix 58
AG4
A
1518 1530Right-handed alpha
Helix 59
AG5
A
1550 1559Right-handed alpha
Helix 60
AG6
A
1574 1582Right-handed alpha
Helix 61
AG7
A
1976 1989Right-handed alpha
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There are 7 sheets in PDB entry 7EEI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
416 418first strand
Strand 2
A
537 541anti-parallel
Strand 3
A
547 552anti-parallel
Strand 4
A
560 567anti-parallel
Strand 5
A
590 592anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
416 418first strand
Strand 2
A
537 541anti-parallel
Strand 3
A
547 552anti-parallel
Strand 4
A
560 567anti-parallel
Strand 5
A
596 598anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
724 727first strand
Strand 2
A
732 735anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
856 857first strand
Strand 2
A
878 879anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
928 931first strand
Strand 2
A
913 917anti-parallel
Strand 3
A
1030 1033parallel
Strand 4
A
1077 1080anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1192 1194first strand
Strand 2
A
1197 1199anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1490 1491first strand
Strand 2
A
1566 1567anti-parallel
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