Analysis of interatomic Contacts of Structural Units in PDB entry:
7EEU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7EEU entry

There are 12 chains in PDB entry 7EEU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 95	LYS 292
B	SER 95	LYS 292
C	SER 95	LYS 292
D	SER 95	LYS 292
E	SER 95	LYS 292
F	SER 96	LYS 292
G	SER 95	LYS 292
H	SER 95	LYS 292
I	C 1	G 30
J	C 1	G 30
K	C 1	G 30
L	C 1	G 30

There are 21 helices in PDB entry 7EEU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	165	170	Right-handed alpha
Helix 2	AA2	A	176	182	Right-handed alpha
Helix 3	AA3	A	277	292	Right-handed alpha
Helix 4	AA4	B	165	170	Right-handed alpha
Helix 5	AA5	B	176	182	Right-handed alpha
Helix 6	AA6	B	277	292	Right-handed alpha
Helix 7	AA7	C	176	182	Right-handed alpha
Helix 8	AA8	C	277	292	Right-handed alpha
Helix 9	AA9	D	165	170	Right-handed alpha
Helix 10	AB1	D	176	182	Right-handed alpha
Helix 11	AB2	D	277	292	Right-handed alpha
Helix 12	AB3	E	165	170	Right-handed alpha
Helix 13	AB4	E	176	182	Right-handed alpha
Helix 14	AB5	E	277	292	Right-handed alpha
Helix 15	AB6	F	165	170	Right-handed alpha
Helix 16	AB7	F	176	182	Right-handed alpha
Helix 17	AB8	F	277	292	Right-handed alpha
Helix 18	AB9	G	176	182	Right-handed alpha
Helix 19	AC1	G	277	292	Right-handed alpha
Helix 20	AC2	H	176	182	Right-handed alpha
Helix 21	AC3	H	277	292	Right-handed alpha

There are 16 sheets in PDB entry 7EEU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	110	113	first strand
Strand 2	A	141	146	anti-parallel
Strand 3	A	230	236	anti-parallel
Strand 4	A	195	197	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	124	127	first strand
Strand 2	A	132	135	anti-parallel
Strand 3	A	264	274	parallel
Strand 4	A	251	258	anti-parallel
Strand 5	A	156	163	anti-parallel
Strand 6	A	214	219	anti-parallel
Strand 7	A	204	207	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	110	113	first strand
Strand 2	B	141	146	anti-parallel
Strand 3	B	230	236	anti-parallel
Strand 4	B	195	197	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	124	127	first strand
Strand 2	B	132	135	anti-parallel
Strand 3	B	264	274	parallel
Strand 4	B	251	258	anti-parallel
Strand 5	B	156	163	anti-parallel
Strand 6	B	214	219	anti-parallel
Strand 7	B	204	207	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	110	113	first strand
Strand 2	C	141	146	anti-parallel
Strand 3	C	230	236	anti-parallel
Strand 4	C	195	197	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	124	127	first strand
Strand 2	C	132	135	anti-parallel
Strand 3	C	264	274	parallel
Strand 4	C	251	258	anti-parallel
Strand 5	C	156	163	anti-parallel
Strand 6	C	214	219	anti-parallel
Strand 7	C	204	207	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	110	113	first strand
Strand 2	D	141	146	anti-parallel
Strand 3	D	230	236	anti-parallel
Strand 4	D	195	197	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	124	127	first strand
Strand 2	D	132	135	anti-parallel
Strand 3	D	264	274	parallel
Strand 4	D	251	258	anti-parallel
Strand 5	D	156	163	anti-parallel
Strand 6	D	214	219	anti-parallel
Strand 7	D	204	207	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	110	113	first strand
Strand 2	E	141	146	anti-parallel
Strand 3	E	230	236	anti-parallel
Strand 4	E	195	197	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	124	127	first strand
Strand 2	E	132	135	anti-parallel
Strand 3	E	264	274	parallel
Strand 4	E	251	258	anti-parallel
Strand 5	E	156	163	anti-parallel
Strand 6	E	214	219	anti-parallel
Strand 7	E	204	207	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	110	113	first strand
Strand 2	F	141	146	anti-parallel
Strand 3	F	230	236	anti-parallel
Strand 4	F	195	197	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	124	127	first strand
Strand 2	F	132	135	anti-parallel
Strand 3	F	264	274	parallel
Strand 4	F	251	258	anti-parallel
Strand 5	F	156	163	anti-parallel
Strand 6	F	214	219	anti-parallel
Strand 7	F	204	207	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	110	113	first strand
Strand 2	G	141	146	anti-parallel
Strand 3	G	230	236	anti-parallel
Strand 4	G	195	197	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	124	127	first strand
Strand 2	G	132	135	anti-parallel
Strand 3	G	264	274	parallel
Strand 4	G	251	258	anti-parallel
Strand 5	G	156	163	anti-parallel
Strand 6	G	214	219	anti-parallel
Strand 7	G	204	207	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	110	113	first strand
Strand 2	H	141	146	anti-parallel
Strand 3	H	230	236	anti-parallel
Strand 4	H	195	197	anti-parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	124	127	first strand
Strand 2	H	132	135	anti-parallel
Strand 3	H	264	274	parallel
Strand 4	H	251	258	anti-parallel
Strand 5	H	156	163	anti-parallel
Strand 6	H	214	219	anti-parallel
Strand 7	H	204	207	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7EEU

Analysis of interatomic Contacts of Structural Units in PDB entry:
7EEU