Analysis of interatomic Contacts of Structural Units in PDB entry:
7EEW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7EEW entry

There are 2 chains in PDB entry 7EEW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 3GLY 638
B
 ALA 2GLU 111
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 7EEW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 12Right-handed alpha
Helix 2
AA2
A
22 45Right-handed alpha
Helix 3
AA3
A
72 88Right-handed alpha
Helix 4
AA4
A
103 114Right-handed alpha
Helix 5
AA5
A
120 134Right-handed alpha
Helix 6
AA6
A
140 156Right-handed alpha
Helix 7
AA7
A
157 161Right-handed 310
Helix 8
AA8
A
164 176Right-handed alpha
Helix 9
AA9
A
191 201Right-handed alpha
Helix 10
AB1
A
218 232Right-handed alpha
Helix 11
AB2
A
281 293Right-handed alpha
Helix 12
AB3
A
307 309Right-handed 310
Helix 13
AB4
A
313 326Right-handed alpha
Helix 14
AB5
A
384 390Right-handed alpha
Helix 15
AB6
A
404 411Right-handed alpha
Helix 16
AB7
A
432 456Right-handed alpha
Helix 17
AB8
A
552 563Right-handed alpha
Helix 18
AB9
A
564 568Right-handed 310
Helix 19
AC1
A
578 584Right-handed alpha
Helix 20
AC2
A
591 636Right-handed alpha
Helix 21
AC3
B
7 26Right-handed alpha
Helix 22
AC4
B
32 46Right-handed alpha
Helix 23
AC5
B
49 59Right-handed alpha
Helix 24
AC6
B
68 72Right-handed 310
Helix 25
AC7
B
77 106Right-handed alpha
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There are 4 sheets in PDB entry 7EEW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 184first strand
Strand 2
A
255 259parallel
Strand 3
A
300 305parallel
Strand 4
A
348 353anti-parallel
Strand 5
A
329 335anti-parallel
Strand 6
A
362 366parallel
Strand 7
A
400 403anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
466 469first strand
Strand 2
A
586 589anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
474 478first strand
Strand 2
A
540 545anti-parallel
Strand 3
A
515 518anti-parallel
Strand 4
A
527 529anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
495 496first strand
Strand 2
A
535 536parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il