Analysis of interatomic Contacts of Structural Units in PDB entry:
7EF6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7EF6 entry

There is 1 chain in PDB entry 7EF6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2ALA 234
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 7EF6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 22Right-handed 310
Helix 2
AA2
A
23 41Right-handed alpha
Helix 3
AA3
A
43 59Right-handed alpha
Helix 4
AA4
A
60 68Right-handed alpha
Helix 5
AA5
A
73 82Right-handed alpha
Helix 6
AA6
A
86 90Right-handed 310
Helix 7
AA7
A
93 103Right-handed alpha
Helix 8
AA8
A
114 126Right-handed alpha
Helix 9
AA9
A
136 141Right-handed alpha
Helix 10
AB1
A
161 173Right-handed alpha
Helix 11
AB2
A
175 177Right-handed 310
Helix 12
AB3
A
185 195Right-handed alpha
Helix 13
AB4
A
217 219Right-handed 310
Helix 14
AB5
A
220 225Right-handed alpha
Helix 15
AB6
A
226 230Right-handed 310
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There is 1 sheet (AA1) in PDB entry 7EF6.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 135first strand
Strand 2
A
106 110parallel
Strand 3
A
8 11parallel
Strand 4
A
179 183parallel
Strand 5
A
198 202parallel
Strand 6
A
213 215parallel
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