Analysis of interatomic Contacts of Structural Units in PDB entry:
7EFT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7EFT entry

There are 2 chains in PDB entry 7EFT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 74ASP 273
B
 ASP 71MET 296
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 7EFT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
75 87Right-handed alpha
Helix 2
AA2
A
87 108Right-handed alpha
Helix 3
AA3
A
140 144Right-handed 310
Helix 4
AA4
B
72 92Right-handed alpha
Helix 5
AA5
B
93 109Right-handed alpha
Helix 6
AA6
B
140 144Right-handed 310
Helix 7
AA7
B
281 295Right-handed alpha
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There are 4 sheets in PDB entry 7EFT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 126first strand
Strand 2
A
134 137anti-parallel
Strand 3
A
169 173anti-parallel
Strand 4
A
157 164anti-parallel
Strand 5
A
150 152anti-parallel
Strand 6
A
265 270anti-parallel
Strand 7
A
117 126anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 209first strand
Strand 2
A
249 256anti-parallel
Strand 3
A
234 244anti-parallel
Strand 4
A
219 222anti-parallel
Strand 5
A
180 185anti-parallel
Strand 6
A
191 195anti-parallel
Strand 7
A
203 205anti-parallel
Strand 8
A
249 256anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
117 126first strand
Strand 2
B
134 137anti-parallel
Strand 3
B
169 173anti-parallel
Strand 4
B
157 164anti-parallel
Strand 5
B
150 152anti-parallel
Strand 6
B
265 270anti-parallel
Strand 7
B
117 126anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
180 185first strand
Strand 2
B
191 195anti-parallel
Strand 3
B
203 205anti-parallel
Strand 4
B
249 256anti-parallel
Strand 5
B
234 244anti-parallel
Strand 6
B
219 222anti-parallel
Strand 7
B
180 185anti-parallel
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