Analysis of interatomic Contacts of Structural Units in PDB entry:
7EGG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7EGG entry

There are 7 chains in PDB entry 7EGG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 VAL 837LYS 1085
E
 ASP 210GLN 800
F
 LYS 6PRO 150
H
 ASN 24TYR 159
I
 PRO 13LEU 132
J
 THR 114PHE 217
L
 ASN 55GLY 130
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 46 helices in PDB entry 7EGG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
D
842 857Right-handed alpha
Helix 2
AA2
D
874 886Right-handed alpha
Helix 3
AA3
D
898 922Right-handed alpha
Helix 4
AA4
D
939 970Right-handed alpha
Helix 5
AA5
D
1059 1066Right-handed alpha
Helix 6
AA6
D
1076 1083Right-handed alpha
Helix 7
AA7
D
1084 1085Right-handed 310
Helix 8
AA8
E
210 212Right-handed 310
Helix 9
AA9
E
213 227Right-handed alpha
Helix 10
AB1
E
229 237Right-handed alpha
Helix 11
AB2
E
239 254Right-handed alpha
Helix 12
AB3
E
256 268Right-handed alpha
Helix 13
AB4
E
269 271Right-handed 310
Helix 14
AB5
E
272 274Right-handed 310
Helix 15
AB6
E
275 285Right-handed alpha
Helix 16
AB7
E
287 292Right-handed alpha
Helix 17
AB8
E
296 303Right-handed alpha
Helix 18
AB9
E
311 319Right-handed alpha
Helix 19
AC1
E
323 327Right-handed 310
Helix 20
AC2
E
328 337Right-handed alpha
Helix 21
AC3
E
348 356Right-handed alpha
Helix 22
AC4
E
433 449Right-handed alpha
Helix 23
AC5
E
509 516Right-handed alpha
Helix 24
AC6
E
523 527Right-handed alpha
Helix 25
AC7
E
741 745Right-handed 310
Helix 26
AC8
E
764 768Right-handed alpha
Helix 27
AC9
F
15 25Right-handed alpha
Helix 28
AD1
F
32 61Right-handed alpha
Helix 29
AD2
F
67 78Right-handed alpha
Helix 30
AD3
F
115 120Right-handed alpha
Helix 31
AD4
H
25 49Right-handed alpha
Helix 32
AD5
H
54 83Right-handed alpha
Helix 33
AD6
H
97 101Right-handed 310
Helix 34
AD7
H
103 105Right-handed 310
Helix 35
AD8
H
106 112Right-handed alpha
Helix 36
AD9
I
14 26Right-handed alpha
Helix 37
AE1
I
32 62Right-handed alpha
Helix 38
AE2
I
67 77Right-handed alpha
Helix 39
AE3
I
88 100Right-handed alpha
Helix 40
AE4
J
115 123Right-handed alpha
Helix 41
AE5
J
131 141Right-handed alpha
Helix 42
AE6
J
148 177Right-handed alpha
Helix 43
AE7
J
196 204Right-handed alpha
Helix 44
AE8
L
61 71Right-handed alpha
Helix 45
AE9
L
77 106Right-handed alpha
Helix 46
AF1
L
112 123Right-handed alpha
Back to top of page

There are 12 sheets in PDB entry 7EGG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
934 936first strand
Strand 2
I
127 129anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
1056 1058first strand
Strand 2
L
74 76parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
308 310first strand
Strand 2
E
340 342parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
782 785first strand
Strand 2
E
791 796anti-parallel
Strand 3
E
461 466parallel
Strand 4
F
131 137anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
473 478first strand
Strand 2
E
484 489anti-parallel
Strand 3
E
493 498anti-parallel
Strand 4
E
536 540anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
504 507first strand
Strand 2
E
528 534anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
546 550first strand
Strand 2
E
558 562anti-parallel
Strand 3
E
566 570anti-parallel
Strand 4
E
577 582anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
588 593first strand
Strand 2
E
600 604anti-parallel
Strand 3
E
609 612anti-parallel
Strand 4
E
621 623anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
634 635first strand
Strand 2
E
641 645anti-parallel
Strand 3
E
650 655anti-parallel
Strand 4
E
661 666anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
672 677first strand
Strand 2
E
683 688anti-parallel
Strand 3
E
693 697anti-parallel
Strand 4
E
703 707anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
714 719first strand
Strand 2
E
725 730anti-parallel
Strand 3
E
734 739anti-parallel
Strand 4
E
769 774anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
86 88first strand
Strand 2
J
209 211anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il