Analysis of interatomic Contacts of Structural Units in PDB entry:
7EGH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7EGH entry

There are 8 chains in PDB entry 7EGH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 333	LYS 1242
B	GLY 19	PRO 988
F	ARG 207	GLN 473
G	PRO 9	ASP 187
H	LYS 161	LEU 232
X	T 37	G 81
Y	C 7	A 51
f	HIS 214	GLN 473

There are 93 helices in PDB entry 7EGH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	346	354	Right-handed alpha
Helix 2	AA2	A	398	403	Right-handed 310
Helix 3	AA3	A	409	414	Right-handed 310
Helix 4	AA4	A	472	478	Right-handed alpha
Helix 5	AA5	A	479	484	Right-handed 310
Helix 6	AA6	A	569	574	Right-handed alpha
Helix 7	AA7	A	592	597	Right-handed alpha
Helix 8	AA8	A	608	614	Right-handed alpha
Helix 9	AA9	A	640	657	Right-handed alpha
Helix 10	AB1	A	667	672	Right-handed 310
Helix 11	AB2	A	796	817	Right-handed alpha
Helix 12	AB3	A	826	834	Right-handed alpha
Helix 13	AB4	A	838	848	Right-handed alpha
Helix 14	AB5	A	872	880	Right-handed alpha
Helix 15	AB6	A	881	901	Right-handed alpha
Helix 16	AB7	A	925	929	Right-handed alpha
Helix 17	AB8	A	930	944	Right-handed alpha
Helix 18	AB9	A	993	998	Right-handed alpha
Helix 19	AC1	A	998	1011	Right-handed alpha
Helix 20	AC2	A	1013	1019	Right-handed alpha
Helix 21	AC3	A	1021	1035	Right-handed alpha
Helix 22	AC4	A	1055	1079	Right-handed alpha
Helix 23	AC5	A	1187	1204	Right-handed alpha
Helix 24	AC6	A	1217	1242	Right-handed alpha
Helix 25	AC7	B	102	117	Right-handed alpha
Helix 26	AC8	B	131	133	Right-handed 310
Helix 27	AC9	B	134	139	Right-handed alpha
Helix 28	AD1	B	169	174	Right-handed alpha
Helix 29	AD2	B	185	189	Right-handed 310
Helix 30	AD3	B	243	247	Right-handed 310
Helix 31	AD4	B	273	281	Right-handed alpha
Helix 32	AD5	B	283	295	Right-handed alpha
Helix 33	AD6	B	328	330	Right-handed 310
Helix 34	AD7	B	338	356	Right-handed alpha
Helix 35	AD8	B	366	409	Right-handed alpha
Helix 36	AD9	B	437	441	Right-handed 310
Helix 37	AE1	B	442	464	Right-handed alpha
Helix 38	AE2	B	465	484	Right-handed alpha
Helix 39	AE3	B	492	495	Right-handed 310
Helix 40	AE4	B	499	512	Right-handed alpha
Helix 41	AE5	B	515	523	Right-handed alpha
Helix 42	AE6	B	595	600	Right-handed alpha
Helix 43	AE7	B	645	656	Right-handed alpha
Helix 44	AE8	B	658	669	Right-handed alpha
Helix 45	AE9	B	670	672	Right-handed 310
Helix 46	AF1	B	674	686	Right-handed alpha
Helix 47	AF2	B	691	709	Right-handed alpha
Helix 48	AF3	B	719	728	Right-handed alpha
Helix 49	AF4	B	745	758	Right-handed alpha
Helix 50	AF5	B	768	781	Right-handed alpha
Helix 51	AF6	B	791	805	Right-handed alpha
Helix 52	AF7	B	823	843	Right-handed alpha
Helix 53	AF8	B	848	864	Right-handed alpha
Helix 54	AF9	B	871	878	Right-handed alpha
Helix 55	AG1	B	883	901	Right-handed alpha
Helix 56	AG2	B	903	916	Right-handed alpha
Helix 57	AG3	B	919	933	Right-handed alpha
Helix 58	AG4	B	946	959	Right-handed alpha
Helix 59	AG5	B	966	980	Right-handed alpha
Helix 60	AG6	F	217	231	Right-handed alpha
Helix 61	AG7	F	235	249	Right-handed alpha
Helix 62	AG8	F	250	253	Right-handed 310
Helix 63	AG9	F	255	270	Right-handed alpha
Helix 64	AH1	F	275	291	Right-handed alpha
Helix 65	AH2	F	300	314	Right-handed alpha
Helix 66	AH3	F	323	344	Right-handed alpha
Helix 67	AH4	F	351	364	Right-handed alpha
Helix 68	AH5	F	369	382	Right-handed alpha
Helix 69	AH6	F	384	391	Right-handed alpha
Helix 70	AH7	F	392	394	Right-handed 310
Helix 71	AH8	F	395	409	Right-handed alpha
Helix 72	AH9	F	415	438	Right-handed alpha
Helix 73	AI1	F	446	452	Right-handed 310
Helix 74	AI2	F	455	473	Right-handed alpha
Helix 75	AI3	G	21	35	Right-handed alpha
Helix 76	AI4	G	37	42	Right-handed alpha
Helix 77	AI5	G	162	176	Right-handed alpha
Helix 78	AI6	H	171	197	Right-handed alpha
Helix 79	AI7	H	221	228	Right-handed alpha
Helix 80	AI8	f	217	231	Right-handed alpha
Helix 81	AI9	f	235	248	Right-handed alpha
Helix 82	AJ1	f	255	269	Right-handed alpha
Helix 83	AJ2	f	275	291	Right-handed alpha
Helix 84	AJ3	f	300	314	Right-handed alpha
Helix 85	AJ4	f	325	341	Right-handed alpha
Helix 86	AJ5	f	350	364	Right-handed alpha
Helix 87	AJ6	f	369	384	Right-handed alpha
Helix 88	AJ7	f	384	391	Right-handed alpha
Helix 89	AJ8	f	392	396	Right-handed 310
Helix 90	AJ9	f	397	404	Right-handed alpha
Helix 91	AK1	f	415	438	Right-handed alpha
Helix 92	AK2	f	445	450	Right-handed alpha
Helix 93	AK3	f	454	473	Right-handed alpha

There are 15 sheets in PDB entry 7EGH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 14 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	786	787	first strand
Strand 2	A	748	756	anti-parallel
Strand 3	A	778	782	anti-parallel
Strand 4	A	679	683	parallel
Strand 5	G	61	79	anti-parallel
Strand 6	G	54	58	anti-parallel
Strand 7	G	43	47	anti-parallel
Strand 8	A	634	638	anti-parallel
Strand 9	A	771	775	parallel
Strand 10	A	761	766	anti-parallel
Strand 11	G	14	19	anti-parallel
Strand 12	G	84	98	parallel
Strand 13	A	697	704	anti-parallel
Strand 14	A	721	723	parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	786	787	first strand
Strand 2	A	748	756	anti-parallel
Strand 3	A	778	782	anti-parallel
Strand 4	A	679	683	parallel
Strand 5	G	61	79	anti-parallel
Strand 6	G	84	98	anti-parallel
Strand 7	A	697	704	anti-parallel
Strand 8	A	721	723	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	786	787	first strand
Strand 2	A	748	756	anti-parallel
Strand 3	A	739	744	anti-parallel
Strand 4	A	697	704	anti-parallel
Strand 5	A	721	723	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	824	825	first strand
Strand 2	A	861	864	anti-parallel
Strand 3	A	850	853	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	947	948	first strand
Strand 2	A	967	968	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1180	1185	first strand
Strand 2	A	1165	1170	anti-parallel
Strand 3	G	179	183	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	80	81	first strand
Strand 2	B	71	77	anti-parallel
Strand 3	B	144	152	anti-parallel
Strand 4	B	44	55	anti-parallel
Strand 5	B	26	39	anti-parallel
Strand 6	B	200	209	parallel
Strand 7	B	231	242	anti-parallel
Strand 8	B	219	225	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	63	65	first strand
Strand 2	B	126	129	anti-parallel
Strand 3	B	83	86	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	159	162	first strand
Strand 2	B	176	179	anti-parallel
Strand 3	B	249	252	anti-parallel
Strand 4	B	213	216	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	255	258	first strand
Strand 2	B	265	269	anti-parallel
Strand 3	B	304	309	parallel
Strand 4	B	322	326	parallel
Strand 5	B	316	319	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	360	361	first strand
Strand 2	B	497	498	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	587	591	first strand
Strand 2	B	543	550	anti-parallel
Strand 3	B	529	538	anti-parallel
Strand 4	B	638	643	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	573	580	first strand
Strand 2	B	563	570	anti-parallel
Strand 3	B	625	630	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	604	605	first strand
Strand 2	B	611	612	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	200	201	first strand
Strand 2	H	213	214	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7EGH

Analysis of interatomic Contacts of Structural Units in PDB entry:
7EGH