Analysis of interatomic Contacts of Structural Units in PDB entry:
7EGM

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7EGM entry

There are 8 chains in PDB entry 7EGM (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 481	HIS 589
B	GLY 676	GLU 1314
C	PHE 368	THR 757
D	ILE 299	ASN 788
H	HIS 53	MET 566
I	ASN 37	THR 154
J	LEU 229	ILE 567
E	GLU 298	SER 781

There are 92 helices in PDB entry 7EGM. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	489	494	Right-handed alpha
Helix 2	AA2	A	494	518	Right-handed alpha
Helix 3	AA3	A	527	538	Right-handed alpha
Helix 4	AA4	A	538	557	Right-handed alpha
Helix 5	AA5	A	575	588	Right-handed alpha
Helix 6	AA6	B	678	692	Right-handed alpha
Helix 7	AA7	B	707	714	Right-handed alpha
Helix 8	AA8	B	719	734	Right-handed alpha
Helix 9	AA9	B	747	765	Right-handed alpha
Helix 10	AB1	B	793	800	Right-handed alpha
Helix 11	AB2	B	883	896	Right-handed alpha
Helix 12	AB3	B	909	929	Right-handed alpha
Helix 13	AB4	B	933	938	Right-handed alpha
Helix 14	AB5	B	942	957	Right-handed alpha
Helix 15	AB6	B	965	983	Right-handed alpha
Helix 16	AB7	B	990	1003	Right-handed alpha
Helix 17	AB8	B	1033	1037	Right-handed 310
Helix 18	AB9	B	1038	1046	Right-handed alpha
Helix 19	AC1	B	1051	1063	Right-handed alpha
Helix 20	AC2	B	1080	1091	Right-handed alpha
Helix 21	AC3	B	1103	1115	Right-handed alpha
Helix 22	AC4	B	1118	1125	Right-handed alpha
Helix 23	AC5	B	1130	1154	Right-handed alpha
Helix 24	AC6	B	1188	1195	Right-handed alpha
Helix 25	AC7	B	1199	1213	Right-handed alpha
Helix 26	AC8	B	1233	1260	Right-handed alpha
Helix 27	AC9	B	1265	1271	Right-handed alpha
Helix 28	AD1	B	1278	1286	Right-handed alpha
Helix 29	AD2	B	1292	1314	Right-handed alpha
Helix 30	AD3	C	369	400	Right-handed alpha
Helix 31	AD4	C	443	450	Right-handed alpha
Helix 32	AD5	C	487	499	Right-handed alpha
Helix 33	AD6	C	509	523	Right-handed alpha
Helix 34	AD7	C	571	584	Right-handed alpha
Helix 35	AD8	C	589	610	Right-handed alpha
Helix 36	AD9	C	635	639	Right-handed 310
Helix 37	AE1	C	641	646	Right-handed alpha
Helix 38	AE2	C	656	663	Right-handed alpha
Helix 39	AE3	D	308	312	Right-handed 310
Helix 40	AE4	D	320	327	Right-handed alpha
Helix 41	AE5	D	328	331	Right-handed 310
Helix 42	AE6	D	343	355	Right-handed alpha
Helix 43	AE7	D	374	388	Right-handed alpha
Helix 44	AE8	D	437	444	Right-handed alpha
Helix 45	AE9	D	451	468	Right-handed alpha
Helix 46	AF1	D	518	522	Right-handed 310
Helix 47	AF2	D	528	542	Right-handed alpha
Helix 48	AF3	D	545	554	Right-handed alpha
Helix 49	AF4	D	557	567	Right-handed alpha
Helix 50	AF5	D	589	594	Right-handed 310
Helix 51	AF6	D	605	615	Right-handed alpha
Helix 52	AF7	D	619	640	Right-handed alpha
Helix 53	AF8	D	673	741	Right-handed alpha
Helix 54	AF9	D	762	776	Right-handed alpha
Helix 55	AG1	H	56	60	Right-handed 310
Helix 56	AG2	H	70	106	Right-handed alpha
Helix 57	AG3	H	313	319	Right-handed alpha
Helix 58	AG4	H	324	338	Right-handed alpha
Helix 59	AG5	H	382	387	Right-handed alpha
Helix 60	AG6	H	403	408	Right-handed alpha
Helix 61	AG7	H	457	510	Right-handed alpha
Helix 62	AG8	H	513	521	Right-handed alpha
Helix 63	AG9	H	522	531	Right-handed alpha
Helix 64	AH1	H	544	549	Right-handed alpha
Helix 65	AH2	H	549	564	Right-handed alpha
Helix 66	AH3	I	68	81	Right-handed alpha
Helix 67	AH4	I	102	122	Right-handed alpha
Helix 68	AH5	I	140	151	Right-handed alpha
Helix 69	AH6	I	152	154	Right-handed 310
Helix 70	AH7	J	230	241	Right-handed alpha
Helix 71	AH8	J	284	294	Right-handed alpha
Helix 72	AH9	J	329	335	Right-handed alpha
Helix 73	AI1	J	450	458	Right-handed alpha
Helix 74	AI2	J	465	500	Right-handed alpha
Helix 75	AI3	E	310	312	Right-handed 310
Helix 76	AI4	E	320	327	Right-handed alpha
Helix 77	AI5	E	328	331	Right-handed 310
Helix 78	AI6	E	339	355	Right-handed alpha
Helix 79	AI7	E	363	371	Right-handed alpha
Helix 80	AI8	E	374	388	Right-handed alpha
Helix 81	AI9	E	433	444	Right-handed alpha
Helix 82	AJ1	E	447	468	Right-handed alpha
Helix 83	AJ2	E	514	524	Right-handed alpha
Helix 84	AJ3	E	528	542	Right-handed alpha
Helix 85	AJ4	E	545	554	Right-handed alpha
Helix 86	AJ5	E	557	566	Right-handed alpha
Helix 87	AJ6	E	591	595	Right-handed 310
Helix 88	AJ7	E	605	616	Right-handed alpha
Helix 89	AJ8	E	619	627	Right-handed alpha
Helix 90	AJ9	E	637	644	Right-handed alpha
Helix 91	AK1	E	648	747	Right-handed alpha
Helix 92	AK2	E	763	776	Right-handed alpha

There are 9 sheets in PDB entry 7EGM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	705	706	first strand
Strand 2	C	426	427	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1006	1007	first strand
Strand 2	B	1025	1026	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	457	461	first strand
Strand 2	C	476	480	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	543	552	first strand
Strand 2	C	555	564	anti-parallel
Strand 3	C	651	654	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	414	417	first strand
Strand 2	E	305	308	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	281	283	first strand
Strand 2	H	157	164	anti-parallel
Strand 3	H	124	132	anti-parallel
Strand 4	H	442	443	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	184	189	first strand
Strand 2	H	291	298	anti-parallel
Strand 3	H	420	427	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	308	309	first strand
Strand 2	H	322	323	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	378	379	first strand
Strand 2	H	401	402	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7EGM

Analysis of interatomic Contacts of Structural Units in PDB entry:
7EGM