Analysis of interatomic Contacts of Structural Units in PDB entry:
7EGT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7EGT entry

There are 4 chains in PDB entry 7EGT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 0	ARG 408
B	PHE 646	ALA 692
C	ASP 0	ARG 408
D	PHE 646	ALA 692

There are 38 helices in PDB entry 7EGT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	27	Right-handed alpha
Helix 2	AA2	A	38	54	Right-handed alpha
Helix 3	AA3	A	63	78	Right-handed alpha
Helix 4	AA4	A	88	93	Right-handed alpha
Helix 5	AA5	A	100	103	Right-handed 310
Helix 6	AA6	A	114	130	Right-handed alpha
Helix 7	AA7	A	140	143	Right-handed 310
Helix 8	AA8	A	147	154	Right-handed alpha
Helix 9	AA9	A	165	176	Right-handed alpha
Helix 10	AB1	A	250	272	Right-handed alpha
Helix 11	AB2	A	274	296	Right-handed alpha
Helix 12	AB3	A	300	303	Right-handed 310
Helix 13	AB4	A	304	310	Right-handed alpha
Helix 14	AB5	A	319	324	Right-handed 310
Helix 15	AB6	A	334	359	Right-handed alpha
Helix 16	AB7	A	363	369	Right-handed 310
Helix 17	AB8	A	373	381	Right-handed alpha
Helix 18	AB9	A	392	399	Right-handed alpha
Helix 19	AC1	B	684	688	Right-handed alpha
Helix 20	AC2	C	13	27	Right-handed alpha
Helix 21	AC3	C	38	54	Right-handed alpha
Helix 22	AC4	C	63	78	Right-handed alpha
Helix 23	AC5	C	88	93	Right-handed alpha
Helix 24	AC6	C	100	103	Right-handed 310
Helix 25	AC7	C	114	130	Right-handed alpha
Helix 26	AC8	C	140	143	Right-handed 310
Helix 27	AC9	C	147	154	Right-handed alpha
Helix 28	AD1	C	165	176	Right-handed alpha
Helix 29	AD2	C	250	272	Right-handed alpha
Helix 30	AD3	C	274	296	Right-handed alpha
Helix 31	AD4	C	300	303	Right-handed 310
Helix 32	AD5	C	304	310	Right-handed alpha
Helix 33	AD6	C	319	324	Right-handed 310
Helix 34	AD7	C	334	359	Right-handed alpha
Helix 35	AD8	C	363	369	Right-handed 310
Helix 36	AD9	C	373	381	Right-handed alpha
Helix 37	AE1	C	392	399	Right-handed alpha
Helix 38	AE2	D	684	688	Right-handed alpha

There are 10 sheets in PDB entry 7EGT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	82	86	first strand
Strand 2	A	133	138	parallel
Strand 3	A	57	61	parallel
Strand 4	A	329	333	parallel
Strand 5	A	384	388	parallel
Strand 6	A	31	35	parallel
Strand 7	A	401	404	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	97	99	first strand
Strand 2	A	104	106	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	156	159	first strand
Strand 2	A	236	239	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	179	180	first strand
Strand 2	A	189	193	parallel
Strand 3	A	196	200	anti-parallel
Strand 4	A	208	213	anti-parallel
Strand 5	A	216	223	anti-parallel
Strand 6	A	230	233	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	678	683	first strand
Strand 2	B	669	674	anti-parallel
Strand 3	B	658	666	anti-parallel
Strand 4	B	651	654	anti-parallel
Strand 5	B	690	691	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	82	86	first strand
Strand 2	C	133	138	parallel
Strand 3	C	57	61	parallel
Strand 4	C	329	333	parallel
Strand 5	C	384	388	parallel
Strand 6	C	31	35	parallel
Strand 7	C	401	404	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	97	99	first strand
Strand 2	C	104	106	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	156	159	first strand
Strand 2	C	236	239	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	179	180	first strand
Strand 2	C	189	193	parallel
Strand 3	C	196	200	anti-parallel
Strand 4	C	208	213	anti-parallel
Strand 5	C	216	223	anti-parallel
Strand 6	C	230	233	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	678	683	first strand
Strand 2	D	669	674	anti-parallel
Strand 3	D	658	666	anti-parallel
Strand 4	D	651	654	anti-parallel
Strand 5	D	690	691	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7EGT

Analysis of interatomic Contacts of Structural Units in PDB entry:
7EGT