Analysis of interatomic Contacts of Structural Units in PDB entry:
7EIB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7EIB entry

There are 5 chains in PDB entry 7EIB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 30CYS 330
D
 LYS 1PHE 9
B
 LEU 5VAL 361
C
 GLU 3ASN 340
E
 GLN 11PHE 61
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 7EIB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
30 64Right-handed alpha
Helix 2
AA2
A
70 89Right-handed alpha
Helix 3
AA3
A
89 98Right-handed alpha
Helix 4
AA4
A
106 141Right-handed alpha
Helix 5
AA5
A
143 148Right-handed alpha
Helix 6
AA6
A
149 168Right-handed alpha
Helix 7
AA7
A
169 175Right-handed alpha
Helix 8
AA8
A
196 211Right-handed alpha
Helix 9
AA9
A
211 239Right-handed alpha
Helix 10
AB1
A
247 278Right-handed alpha
Helix 11
AB2
A
283 302Right-handed alpha
Helix 12
AB3
A
302 313Right-handed alpha
Helix 13
AB4
A
316 325Right-handed alpha
Helix 14
AB5
B
6 33Right-handed alpha
Helix 15
AB6
B
45 57Right-handed alpha
Helix 16
AB7
B
210 218Right-handed 310
Helix 17
AB8
B
229 246Right-handed alpha
Helix 18
AB9
B
247 250Right-handed 310
Helix 19
AC1
B
260 271Right-handed alpha
Helix 20
AC2
B
274 278Right-handed 310
Helix 21
AC3
B
279 284Right-handed 310
Helix 22
AC4
B
298 320Right-handed alpha
Helix 23
AC5
B
337 358Right-handed alpha
Helix 24
AC6
C
4 26Right-handed alpha
Helix 25
AC7
C
29 34Right-handed alpha
Helix 26
AC8
C
35 37Right-handed 310
Helix 27
AC9
E
12 24Right-handed alpha
Helix 28
AD1
E
29 44Right-handed alpha
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There are 9 sheets in PDB entry 7EIB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 180first strand
Strand 2
A
187 191anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
184 191first strand
Strand 2
B
194 201anti-parallel
Strand 3
B
34 40parallel
Strand 4
B
220 226parallel
Strand 5
B
253 259parallel
Strand 6
B
326 330parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
47 51first strand
Strand 2
C
336 339anti-parallel
Strand 3
C
327 331anti-parallel
Strand 4
C
315 320anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
58 63first strand
Strand 2
C
69 74anti-parallel
Strand 3
C
78 83anti-parallel
Strand 4
C
89 94anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
100 105first strand
Strand 2
C
111 116anti-parallel
Strand 3
C
121 125anti-parallel
Strand 4
C
134 139anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
146 153first strand
Strand 2
C
156 161anti-parallel
Strand 3
C
166 170anti-parallel
Strand 4
C
175 180anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
187 192first strand
Strand 2
C
198 203anti-parallel
Strand 3
C
208 212anti-parallel
Strand 4
C
218 222anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
229 234first strand
Strand 2
C
240 245anti-parallel
Strand 3
C
249 254anti-parallel
Strand 4
C
259 264anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
273 278first strand
Strand 2
C
284 289anti-parallel
Strand 3
C
294 298anti-parallel
Strand 4
C
303 307anti-parallel
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