Analysis of interatomic Contacts of Structural Units in PDB entry:
7EIJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7EIJ entry

There are 2 chains in PDB entry 7EIJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 1	TRP 586
B	ASN 1	TRP 586

There are 42 helices in PDB entry 7EIJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	24	37	Right-handed alpha
Helix 2	AA2	A	41	43	Right-handed 310
Helix 3	AA3	A	81	90	Right-handed alpha
Helix 4	AA4	A	134	142	Right-handed alpha
Helix 5	AA5	A	153	157	Right-handed 310
Helix 6	AA6	A	160	176	Right-handed alpha
Helix 7	AA7	A	176	184	Right-handed alpha
Helix 8	AA8	A	201	209	Right-handed alpha
Helix 9	AA9	A	225	229	Right-handed 310
Helix 10	AB1	A	230	251	Right-handed alpha
Helix 11	AB2	A	261	271	Right-handed alpha
Helix 12	AB3	A	287	299	Right-handed alpha
Helix 13	AB4	A	351	357	Right-handed alpha
Helix 14	AB5	A	370	378	Right-handed alpha
Helix 15	AB6	A	395	401	Right-handed 310
Helix 16	AB7	A	438	448	Right-handed alpha
Helix 17	AB8	A	462	467	Right-handed alpha
Helix 18	AB9	A	468	473	Right-handed 310
Helix 19	AC1	A	475	491	Right-handed alpha
Helix 20	AC2	A	524	534	Right-handed alpha
Helix 21	AC3	A	554	570	Right-handed alpha
Helix 22	AC4	B	24	37	Right-handed alpha
Helix 23	AC5	B	41	43	Right-handed 310
Helix 24	AC6	B	81	90	Right-handed alpha
Helix 25	AC7	B	134	142	Right-handed alpha
Helix 26	AC8	B	153	157	Right-handed 310
Helix 27	AC9	B	160	175	Right-handed alpha
Helix 28	AD1	B	176	184	Right-handed alpha
Helix 29	AD2	B	201	209	Right-handed alpha
Helix 30	AD3	B	225	229	Right-handed 310
Helix 31	AD4	B	230	251	Right-handed alpha
Helix 32	AD5	B	261	271	Right-handed alpha
Helix 33	AD6	B	287	299	Right-handed alpha
Helix 34	AD7	B	351	357	Right-handed alpha
Helix 35	AD8	B	370	378	Right-handed alpha
Helix 36	AD9	B	395	401	Right-handed 310
Helix 37	AE1	B	439	448	Right-handed alpha
Helix 38	AE2	B	462	467	Right-handed alpha
Helix 39	AE3	B	468	473	Right-handed 310
Helix 40	AE4	B	475	491	Right-handed alpha
Helix 41	AE5	B	524	534	Right-handed alpha
Helix 42	AE6	B	554	570	Right-handed alpha

There are 14 sheets in PDB entry 7EIJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	14	15	first strand
Strand 2	A	337	343	parallel
Strand 3	A	326	332	anti-parallel
Strand 4	A	309	315	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	305	306	first strand
Strand 2	A	45	48	parallel
Strand 3	A	18	21	parallel
Strand 4	A	345	348	parallel
Strand 5	A	541	543	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	60	63	first strand
Strand 2	A	66	71	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	77	78	first strand
Strand 2	A	279	282	anti-parallel
Strand 3	A	111	113	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	129	132	first strand
Strand 2	A	123	126	anti-parallel
Strand 3	A	406	409	parallel
Strand 4	A	415	421	anti-parallel
Strand 5	A	428	434	anti-parallel
Strand 6	A	386	392	anti-parallel
Strand 7	A	501	506	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	187	189	first strand
Strand 2	A	196	198	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	380	383	first strand
Strand 2	A	516	519	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	14	15	first strand
Strand 2	B	337	343	parallel
Strand 3	B	326	332	anti-parallel
Strand 4	B	309	315	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	305	306	first strand
Strand 2	B	45	48	parallel
Strand 3	B	18	21	parallel
Strand 4	B	345	349	parallel
Strand 5	B	541	544	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	60	63	first strand
Strand 2	B	66	71	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	77	78	first strand
Strand 2	B	279	282	anti-parallel
Strand 3	B	111	113	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	129	132	first strand
Strand 2	B	123	126	anti-parallel
Strand 3	B	405	409	parallel
Strand 4	B	415	421	anti-parallel
Strand 5	B	428	431	anti-parallel
Strand 6	B	386	392	anti-parallel
Strand 7	B	501	506	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	187	189	first strand
Strand 2	B	196	198	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	380	383	first strand
Strand 2	B	516	519	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7EIJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7EIJ