Analysis of interatomic Contacts of Structural Units in PDB entry:
7EJ1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7EJ1 entry

There are 8 chains in PDB entry 7EJ1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 36	SER 361
B	GLY 103	GLY 503
C	LEU 36	SER 361
D	GLY 103	GLY 503
E	LEU 36	SER 361
F	GLY 103	GLY 503
G	LEU 36	SER 361
H	GLY 103	GLY 503

There are140 helices in PDB entry 7EJ1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	65	78	Right-handed alpha
Helix 2	AA2	A	96	107	Right-handed alpha
Helix 3	AA3	A	109	113	Right-handed 310
Helix 4	AA4	A	125	129	Right-handed 310
Helix 5	AA5	A	132	147	Right-handed alpha
Helix 6	AA6	A	165	179	Right-handed alpha
Helix 7	AA7	A	191	205	Right-handed alpha
Helix 8	AA8	A	222	228	Right-handed alpha
Helix 9	AA9	A	228	236	Right-handed alpha
Helix 10	AB1	A	270	278	Right-handed alpha
Helix 11	AB2	A	279	287	Right-handed alpha
Helix 12	AB3	A	290	299	Right-handed alpha
Helix 13	AB4	A	302	312	Right-handed alpha
Helix 14	AB5	A	326	335	Right-handed alpha
Helix 15	AB6	A	339	343	Right-handed 310
Helix 16	AB7	A	344	356	Right-handed alpha
Helix 17	AB8	B	119	123	Right-handed alpha
Helix 18	AB9	B	135	139	Right-handed 310
Helix 19	AC1	B	155	166	Right-handed alpha
Helix 20	AC2	B	176	188	Right-handed alpha
Helix 21	AC3	B	190	202	Right-handed alpha
Helix 22	AC4	B	215	225	Right-handed alpha
Helix 23	AC5	B	230	255	Right-handed alpha
Helix 24	AC6	B	295	315	Right-handed alpha
Helix 25	AC7	B	319	324	Right-handed alpha
Helix 26	AC8	B	326	331	Right-handed alpha
Helix 27	AC9	B	332	335	Right-handed 310
Helix 28	AD1	B	336	347	Right-handed alpha
Helix 29	AD2	B	360	369	Right-handed alpha
Helix 30	AD3	B	370	380	Right-handed 310
Helix 31	AD4	B	381	393	Right-handed alpha
Helix 32	AD5	B	394	421	Right-handed alpha
Helix 33	AD6	B	434	443	Right-handed alpha
Helix 34	AD7	B	454	471	Right-handed alpha
Helix 35	AD8	B	476	492	Right-handed alpha
Helix 36	AD9	C	65	78	Right-handed alpha
Helix 37	AE1	C	96	107	Right-handed alpha
Helix 38	AE2	C	109	113	Right-handed 310
Helix 39	AE3	C	125	129	Right-handed 310
Helix 40	AE4	C	132	147	Right-handed alpha
Helix 41	AE5	C	165	179	Right-handed alpha
Helix 42	AE6	C	191	205	Right-handed alpha
Helix 43	AE7	C	222	228	Right-handed alpha
Helix 44	AE8	C	228	236	Right-handed alpha
Helix 45	AE9	C	270	278	Right-handed alpha
Helix 46	AF1	C	279	287	Right-handed alpha
Helix 47	AF2	C	290	299	Right-handed alpha
Helix 48	AF3	C	302	312	Right-handed alpha
Helix 49	AF4	C	326	335	Right-handed alpha
Helix 50	AF5	C	339	343	Right-handed 310
Helix 51	AF6	C	344	356	Right-handed alpha
Helix 52	AF7	D	119	123	Right-handed alpha
Helix 53	AF8	D	135	139	Right-handed 310
Helix 54	AF9	D	155	166	Right-handed alpha
Helix 55	AG1	D	176	188	Right-handed alpha
Helix 56	AG2	D	190	202	Right-handed alpha
Helix 57	AG3	D	215	225	Right-handed alpha
Helix 58	AG4	D	230	255	Right-handed alpha
Helix 59	AG5	D	295	315	Right-handed alpha
Helix 60	AG6	D	319	324	Right-handed alpha
Helix 61	AG7	D	326	331	Right-handed alpha
Helix 62	AG8	D	332	335	Right-handed 310
Helix 63	AG9	D	336	347	Right-handed alpha
Helix 64	AH1	D	360	369	Right-handed alpha
Helix 65	AH2	D	370	380	Right-handed 310
Helix 66	AH3	D	381	393	Right-handed alpha
Helix 67	AH4	D	394	421	Right-handed alpha
Helix 68	AH5	D	434	443	Right-handed alpha
Helix 69	AH6	D	454	471	Right-handed alpha
Helix 70	AH7	D	476	492	Right-handed alpha
Helix 71	AH8	E	65	78	Right-handed alpha
Helix 72	AH9	E	96	107	Right-handed alpha
Helix 73	AI1	E	109	113	Right-handed 310
Helix 74	AI2	E	125	129	Right-handed 310
Helix 75	AI3	E	132	147	Right-handed alpha
Helix 76	AI4	E	165	179	Right-handed alpha
Helix 77	AI5	E	191	205	Right-handed alpha
Helix 78	AI6	E	222	228	Right-handed alpha
Helix 79	AI7	E	228	236	Right-handed alpha
Helix 80	AI8	E	270	278	Right-handed alpha
Helix 81	AI9	E	279	287	Right-handed alpha
Helix 82	AJ1	E	290	299	Right-handed alpha
Helix 83	AJ2	E	302	312	Right-handed alpha
Helix 84	AJ3	E	326	335	Right-handed alpha
Helix 85	AJ4	E	339	343	Right-handed 310
Helix 86	AJ5	E	344	356	Right-handed alpha
Helix 87	AJ6	F	119	123	Right-handed alpha
Helix 88	AJ7	F	135	139	Right-handed 310
Helix 89	AJ8	F	155	166	Right-handed alpha
Helix 90	AJ9	F	176	188	Right-handed alpha
Helix 91	AK1	F	190	202	Right-handed alpha
Helix 92	AK2	F	215	225	Right-handed alpha
Helix 93	AK3	F	230	255	Right-handed alpha
Helix 94	AK4	F	295	315	Right-handed alpha
Helix 95	AK5	F	319	324	Right-handed alpha
Helix 96	AK6	F	326	331	Right-handed alpha
Helix 97	AK7	F	332	335	Right-handed 310
Helix 98	AK8	F	336	347	Right-handed alpha
Helix 99	AK9	F	360	369	Right-handed alpha
Helix 100	AL1	F	370	380	Right-handed 310
Helix 101	AL2	F	381	393	Right-handed alpha
Helix 102	AL3	F	394	421	Right-handed alpha
Helix 103	AL4	F	434	443	Right-handed alpha
Helix 104	AL5	F	454	471	Right-handed alpha
Helix 105	AL6	F	476	492	Right-handed alpha
Helix 106	AL7	G	65	78	Right-handed alpha
Helix 107	AL8	G	96	107	Right-handed alpha
Helix 108	AL9	G	109	113	Right-handed 310
Helix 109	AM1	G	125	129	Right-handed 310
Helix 110	AM2	G	132	147	Right-handed alpha
Helix 111	AM3	G	165	179	Right-handed alpha
Helix 112	AM4	G	191	205	Right-handed alpha
Helix 113	AM5	G	222	228	Right-handed alpha
Helix 114	AM6	G	228	236	Right-handed alpha
Helix 115	AM7	G	270	278	Right-handed alpha
Helix 116	AM8	G	279	287	Right-handed alpha
Helix 117	AM9	G	290	299	Right-handed alpha
Helix 118	AN1	G	302	312	Right-handed alpha
Helix 119	AN2	G	326	335	Right-handed alpha
Helix 120	AN3	G	339	343	Right-handed 310
Helix 121	AN4	G	344	356	Right-handed alpha
Helix 122	AN5	H	119	123	Right-handed alpha
Helix 123	AN6	H	135	139	Right-handed 310
Helix 124	AN7	H	155	166	Right-handed alpha
Helix 125	AN8	H	176	188	Right-handed alpha
Helix 126	AN9	H	190	202	Right-handed alpha
Helix 127	AO1	H	215	225	Right-handed alpha
Helix 128	AO2	H	230	255	Right-handed alpha
Helix 129	AO3	H	295	315	Right-handed alpha
Helix 130	AO4	H	319	324	Right-handed alpha
Helix 131	AO5	H	326	331	Right-handed alpha
Helix 132	AO6	H	332	335	Right-handed 310
Helix 133	AO7	H	336	347	Right-handed alpha
Helix 134	AO8	H	360	369	Right-handed alpha
Helix 135	AO9	H	370	380	Right-handed 310
Helix 136	AP1	H	381	393	Right-handed alpha
Helix 137	AP2	H	394	421	Right-handed alpha
Helix 138	AP3	H	434	443	Right-handed alpha
Helix 139	AP4	H	454	471	Right-handed alpha
Helix 140	AP5	H	476	492	Right-handed alpha

There are 16 sheets in PDB entry 7EJ1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	39	41	first strand
Strand 2	A	48	50	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	52	54	first strand
Strand 2	A	319	322	parallel
Strand 3	A	241	243	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	84	first strand
Strand 2	A	114	119	parallel
Strand 3	A	152	157	parallel
Strand 4	A	182	188	parallel
Strand 5	A	213	214	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	113	118	first strand
Strand 2	B	105	110	anti-parallel
Strand 3	B	147	149	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	39	41	first strand
Strand 2	C	48	50	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	52	54	first strand
Strand 2	C	319	322	parallel
Strand 3	C	241	243	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	83	84	first strand
Strand 2	C	114	119	parallel
Strand 3	C	152	157	parallel
Strand 4	C	182	188	parallel
Strand 5	C	213	214	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	113	118	first strand
Strand 2	D	105	110	anti-parallel
Strand 3	D	147	149	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	39	41	first strand
Strand 2	E	48	50	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	52	54	first strand
Strand 2	E	319	322	parallel
Strand 3	E	241	243	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	83	84	first strand
Strand 2	E	114	119	parallel
Strand 3	E	152	157	parallel
Strand 4	E	182	188	parallel
Strand 5	E	213	214	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	113	118	first strand
Strand 2	F	105	110	anti-parallel
Strand 3	F	147	149	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	39	41	first strand
Strand 2	G	48	50	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	52	54	first strand
Strand 2	G	319	322	parallel
Strand 3	G	241	243	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	83	84	first strand
Strand 2	G	114	119	parallel
Strand 3	G	152	157	parallel
Strand 4	G	182	188	parallel
Strand 5	G	213	214	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	113	118	first strand
Strand 2	H	105	110	anti-parallel
Strand 3	H	147	149	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7EJ1

Analysis of interatomic Contacts of Structural Units in PDB entry:
7EJ1