Analysis of interatomic Contacts of Structural Units in PDB entry:
7EJ2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7EJ2 entry

There are 8 chains in PDB entry 7EJ2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 36	SER 361
B	GLY 103	GLY 503
C	LEU 36	SER 361
D	GLY 103	GLY 503
E	LEU 36	SER 361
F	GLY 103	GLY 503
G	LEU 36	SER 361
H	GLY 103	GLY 503

There are144 helices in PDB entry 7EJ2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	65	78	Right-handed alpha
Helix 2	AA2	A	89	93	Right-handed 310
Helix 3	AA3	A	96	107	Right-handed alpha
Helix 4	AA4	A	109	113	Right-handed 310
Helix 5	AA5	A	132	143	Right-handed alpha
Helix 6	AA6	A	165	179	Right-handed alpha
Helix 7	AA7	A	191	201	Right-handed alpha
Helix 8	AA8	A	223	228	Right-handed alpha
Helix 9	AA9	A	228	236	Right-handed alpha
Helix 10	AB1	A	270	278	Right-handed alpha
Helix 11	AB2	A	279	299	Right-handed alpha
Helix 12	AB3	A	302	312	Right-handed alpha
Helix 13	AB4	A	326	335	Right-handed alpha
Helix 14	AB5	A	336	338	Right-handed 310
Helix 15	AB6	A	339	343	Right-handed 310
Helix 16	AB7	A	344	356	Right-handed alpha
Helix 17	AB8	B	119	123	Right-handed alpha
Helix 18	AB9	B	135	140	Right-handed 310
Helix 19	AC1	B	155	166	Right-handed alpha
Helix 20	AC2	B	176	187	Right-handed alpha
Helix 21	AC3	B	190	199	Right-handed alpha
Helix 22	AC4	B	215	222	Right-handed alpha
Helix 23	AC5	B	230	255	Right-handed alpha
Helix 24	AC6	B	256	261	Right-handed alpha
Helix 25	AC7	B	298	315	Right-handed alpha
Helix 26	AC8	B	326	331	Right-handed alpha
Helix 27	AC9	B	332	336	Right-handed 310
Helix 28	AD1	B	339	344	Right-handed alpha
Helix 29	AD2	B	360	370	Right-handed alpha
Helix 30	AD3	B	371	379	Right-handed 310
Helix 31	AD4	B	381	393	Right-handed alpha
Helix 32	AD5	B	394	419	Right-handed alpha
Helix 33	AD6	B	434	443	Right-handed alpha
Helix 34	AD7	B	459	473	Right-handed alpha
Helix 35	AD8	B	475	489	Right-handed alpha
Helix 36	AD9	B	493	502	Right-handed alpha
Helix 37	AE1	C	65	78	Right-handed alpha
Helix 38	AE2	C	89	93	Right-handed 310
Helix 39	AE3	C	96	107	Right-handed alpha
Helix 40	AE4	C	109	113	Right-handed 310
Helix 41	AE5	C	132	143	Right-handed alpha
Helix 42	AE6	C	165	179	Right-handed alpha
Helix 43	AE7	C	191	201	Right-handed alpha
Helix 44	AE8	C	223	228	Right-handed alpha
Helix 45	AE9	C	228	236	Right-handed alpha
Helix 46	AF1	C	270	278	Right-handed alpha
Helix 47	AF2	C	279	299	Right-handed alpha
Helix 48	AF3	C	302	312	Right-handed alpha
Helix 49	AF4	C	326	335	Right-handed alpha
Helix 50	AF5	C	336	338	Right-handed 310
Helix 51	AF6	C	339	343	Right-handed 310
Helix 52	AF7	C	344	356	Right-handed alpha
Helix 53	AF8	D	119	123	Right-handed alpha
Helix 54	AF9	D	135	140	Right-handed 310
Helix 55	AG1	D	155	166	Right-handed alpha
Helix 56	AG2	D	176	187	Right-handed alpha
Helix 57	AG3	D	190	199	Right-handed alpha
Helix 58	AG4	D	215	222	Right-handed alpha
Helix 59	AG5	D	230	255	Right-handed alpha
Helix 60	AG6	D	256	261	Right-handed alpha
Helix 61	AG7	D	298	315	Right-handed alpha
Helix 62	AG8	D	326	331	Right-handed alpha
Helix 63	AG9	D	332	336	Right-handed 310
Helix 64	AH1	D	339	344	Right-handed alpha
Helix 65	AH2	D	360	370	Right-handed alpha
Helix 66	AH3	D	371	379	Right-handed 310
Helix 67	AH4	D	381	393	Right-handed alpha
Helix 68	AH5	D	394	419	Right-handed alpha
Helix 69	AH6	D	434	443	Right-handed alpha
Helix 70	AH7	D	459	473	Right-handed alpha
Helix 71	AH8	D	475	489	Right-handed alpha
Helix 72	AH9	D	493	502	Right-handed alpha
Helix 73	AI1	E	65	78	Right-handed alpha
Helix 74	AI2	E	89	93	Right-handed 310
Helix 75	AI3	E	96	107	Right-handed alpha
Helix 76	AI4	E	109	113	Right-handed 310
Helix 77	AI5	E	132	143	Right-handed alpha
Helix 78	AI6	E	165	179	Right-handed alpha
Helix 79	AI7	E	191	201	Right-handed alpha
Helix 80	AI8	E	223	228	Right-handed alpha
Helix 81	AI9	E	228	236	Right-handed alpha
Helix 82	AJ1	E	270	278	Right-handed alpha
Helix 83	AJ2	E	279	299	Right-handed alpha
Helix 84	AJ3	E	302	312	Right-handed alpha
Helix 85	AJ4	E	326	335	Right-handed alpha
Helix 86	AJ5	E	336	338	Right-handed 310
Helix 87	AJ6	E	339	343	Right-handed 310
Helix 88	AJ7	E	344	356	Right-handed alpha
Helix 89	AJ8	F	119	123	Right-handed alpha
Helix 90	AJ9	F	135	140	Right-handed 310
Helix 91	AK1	F	155	166	Right-handed alpha
Helix 92	AK2	F	176	187	Right-handed alpha
Helix 93	AK3	F	190	199	Right-handed alpha
Helix 94	AK4	F	215	222	Right-handed alpha
Helix 95	AK5	F	230	255	Right-handed alpha
Helix 96	AK6	F	256	261	Right-handed alpha
Helix 97	AK7	F	298	315	Right-handed alpha
Helix 98	AK8	F	326	331	Right-handed alpha
Helix 99	AK9	F	332	336	Right-handed 310
Helix 100	AL1	F	339	344	Right-handed alpha
Helix 101	AL2	F	360	370	Right-handed alpha
Helix 102	AL3	F	371	379	Right-handed 310
Helix 103	AL4	F	381	393	Right-handed alpha
Helix 104	AL5	F	394	419	Right-handed alpha
Helix 105	AL6	F	434	443	Right-handed alpha
Helix 106	AL7	F	459	473	Right-handed alpha
Helix 107	AL8	F	475	489	Right-handed alpha
Helix 108	AL9	F	493	502	Right-handed alpha
Helix 109	AM1	G	65	78	Right-handed alpha
Helix 110	AM2	G	89	93	Right-handed 310
Helix 111	AM3	G	96	107	Right-handed alpha
Helix 112	AM4	G	109	113	Right-handed 310
Helix 113	AM5	G	132	143	Right-handed alpha
Helix 114	AM6	G	165	179	Right-handed alpha
Helix 115	AM7	G	191	201	Right-handed alpha
Helix 116	AM8	G	223	228	Right-handed alpha
Helix 117	AM9	G	228	236	Right-handed alpha
Helix 118	AN1	G	270	278	Right-handed alpha
Helix 119	AN2	G	279	299	Right-handed alpha
Helix 120	AN3	G	302	312	Right-handed alpha
Helix 121	AN4	G	326	335	Right-handed alpha
Helix 122	AN5	G	336	338	Right-handed 310
Helix 123	AN6	G	339	343	Right-handed 310
Helix 124	AN7	G	344	356	Right-handed alpha
Helix 125	AN8	H	119	123	Right-handed alpha
Helix 126	AN9	H	135	140	Right-handed 310
Helix 127	AO1	H	155	166	Right-handed alpha
Helix 128	AO2	H	176	187	Right-handed alpha
Helix 129	AO3	H	190	199	Right-handed alpha
Helix 130	AO4	H	215	222	Right-handed alpha
Helix 131	AO5	H	230	255	Right-handed alpha
Helix 132	AO6	H	256	261	Right-handed alpha
Helix 133	AO7	H	298	315	Right-handed alpha
Helix 134	AO8	H	326	331	Right-handed alpha
Helix 135	AO9	H	332	336	Right-handed 310
Helix 136	AP1	H	339	344	Right-handed alpha
Helix 137	AP2	H	360	370	Right-handed alpha
Helix 138	AP3	H	371	379	Right-handed 310
Helix 139	AP4	H	381	393	Right-handed alpha
Helix 140	AP5	H	394	419	Right-handed alpha
Helix 141	AP6	H	434	443	Right-handed alpha
Helix 142	AP7	H	459	473	Right-handed alpha
Helix 143	AP8	H	475	489	Right-handed alpha
Helix 144	AP9	H	493	502	Right-handed alpha

There are 16 sheets in PDB entry 7EJ2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	39	41	first strand
Strand 2	A	48	50	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	52	54	first strand
Strand 2	A	319	322	parallel
Strand 3	A	241	243	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	84	first strand
Strand 2	A	114	119	parallel
Strand 3	A	154	157	parallel
Strand 4	A	184	188	parallel
Strand 5	A	213	214	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	113	118	first strand
Strand 2	B	105	110	anti-parallel
Strand 3	B	147	149	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	39	41	first strand
Strand 2	C	48	50	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	52	54	first strand
Strand 2	C	319	322	parallel
Strand 3	C	241	243	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	83	84	first strand
Strand 2	C	114	119	parallel
Strand 3	C	154	157	parallel
Strand 4	C	184	188	parallel
Strand 5	C	213	214	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	113	118	first strand
Strand 2	D	105	110	anti-parallel
Strand 3	D	147	149	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	39	41	first strand
Strand 2	E	48	50	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	52	54	first strand
Strand 2	E	319	322	parallel
Strand 3	E	241	243	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	83	84	first strand
Strand 2	E	114	119	parallel
Strand 3	E	154	157	parallel
Strand 4	E	184	188	parallel
Strand 5	E	213	214	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	113	118	first strand
Strand 2	F	105	110	anti-parallel
Strand 3	F	147	149	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	39	41	first strand
Strand 2	G	48	50	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	52	54	first strand
Strand 2	G	319	322	parallel
Strand 3	G	241	243	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	83	84	first strand
Strand 2	G	114	119	parallel
Strand 3	G	154	157	parallel
Strand 4	G	184	188	parallel
Strand 5	G	213	214	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	113	118	first strand
Strand 2	H	105	110	anti-parallel
Strand 3	H	147	149	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7EJ2

Analysis of interatomic Contacts of Structural Units in PDB entry:
7EJ2