Analysis of interatomic Contacts of Structural Units in PDB entry:
7EJ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7EJ6 entry

There are 4 chains in PDB entry 7EJ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ILE 16ASP 334
C
 ILE 16ASP 334
A
 ILE 16ASP 334
D
 T 1 T 9
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 7EJ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
20 25Right-handed 310
Helix 2
AA2
B
30 38Right-handed alpha
Helix 3
AA3
B
43 48Right-handed alpha
Helix 4
AA4
B
50 55Right-handed alpha
Helix 5
AA5
B
61 76Right-handed alpha
Helix 6
AA6
B
83 90Right-handed alpha
Helix 7
AA7
B
91 93Right-handed 310
Helix 8
AA8
B
100 108Right-handed alpha
Helix 9
AA9
B
126 137Right-handed alpha
Helix 10
AB1
B
141 145Right-handed 310
Helix 11
AB2
B
161 171Right-handed alpha
Helix 12
AB3
B
175 181Right-handed alpha
Helix 13
AB4
B
190 205Right-handed alpha
Helix 14
AB5
B
219 226Right-handed alpha
Helix 15
AB6
B
231 253Right-handed alpha
Helix 16
AB7
B
283 291Right-handed alpha
Helix 17
AB8
C
20 25Right-handed 310
Helix 18
AB9
C
30 38Right-handed alpha
Helix 19
AC1
C
43 48Right-handed alpha
Helix 20
AC2
C
50 55Right-handed alpha
Helix 21
AC3
C
61 76Right-handed alpha
Helix 22
AC4
C
83 90Right-handed alpha
Helix 23
AC5
C
91 93Right-handed 310
Helix 24
AC6
C
100 108Right-handed alpha
Helix 25
AC7
C
129 137Right-handed alpha
Helix 26
AC8
C
141 145Right-handed 310
Helix 27
AC9
C
161 171Right-handed alpha
Helix 28
AD1
C
175 181Right-handed alpha
Helix 29
AD2
C
190 205Right-handed alpha
Helix 30
AD3
C
219 226Right-handed alpha
Helix 31
AD4
C
231 253Right-handed alpha
Helix 32
AD5
C
283 291Right-handed alpha
Helix 33
AD6
A
20 25Right-handed 310
Helix 34
AD7
A
30 38Right-handed alpha
Helix 35
AD8
A
43 48Right-handed alpha
Helix 36
AD9
A
50 55Right-handed alpha
Helix 37
AE1
A
61 76Right-handed alpha
Helix 38
AE2
A
83 90Right-handed alpha
Helix 39
AE3
A
91 93Right-handed 310
Helix 40
AE4
A
100 108Right-handed alpha
Helix 41
AE5
A
127 137Right-handed alpha
Helix 42
AE6
A
141 145Right-handed 310
Helix 43
AE7
A
161 171Right-handed alpha
Helix 44
AE8
A
175 181Right-handed alpha
Helix 45
AE9
A
190 205Right-handed alpha
Helix 46
AF1
A
219 226Right-handed alpha
Helix 47
AF2
A
231 253Right-handed alpha
Helix 48
AF3
A
283 291Right-handed alpha
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There are 6 sheets in PDB entry 7EJ6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
183 187first strand
Strand 2
B
150 155parallel
Strand 3
B
210 216parallel
Strand 4
B
256 261parallel
Strand 5
B
115 121parallel
Strand 6
B
293 299parallel
Strand 7
B
304 311anti-parallel
Strand 8
B
318 324anti-parallel
Strand 9
B
329 330anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
263 264first strand
Strand 2
B
279 281anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
183 187first strand
Strand 2
C
150 155parallel
Strand 3
C
210 216parallel
Strand 4
C
256 261parallel
Strand 5
C
115 121parallel
Strand 6
C
293 299parallel
Strand 7
C
304 311anti-parallel
Strand 8
C
318 324anti-parallel
Strand 9
C
329 330anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
263 264first strand
Strand 2
C
279 281anti-parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 187first strand
Strand 2
A
150 155parallel
Strand 3
A
210 216parallel
Strand 4
A
256 261parallel
Strand 5
A
115 121parallel
Strand 6
A
293 299parallel
Strand 7
A
304 311anti-parallel
Strand 8
A
318 324anti-parallel
Strand 9
A
329 330anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
263 264first strand
Strand 2
A
279 281anti-parallel
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