Analysis of interatomic Contacts of Structural Units in PDB entry:
7EJ9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7EJ9 entry

There are 2 chains in PDB entry 7EJ9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 21TYR 506
B
 ALA 21TYR 506
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 7EJ9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 44Right-handed alpha
Helix 2
AA2
A
58 62Right-handed 310
Helix 3
AA3
A
66 86Right-handed alpha
Helix 4
AA4
A
97 109Right-handed alpha
Helix 5
AA5
A
121 139Right-handed alpha
Helix 6
AA6
A
152 160Right-handed alpha
Helix 7
AA7
A
167 177Right-handed alpha
Helix 8
AA8
A
189 196Right-handed alpha
Helix 9
AA9
A
203 209Right-handed alpha
Helix 10
AB1
A
231 243Right-handed alpha
Helix 11
AB2
A
244 252Right-handed alpha
Helix 12
AB3
A
258 263Right-handed 310
Helix 13
AB4
A
269 275Right-handed alpha
Helix 14
AB5
A
279 295Right-handed alpha
Helix 15
AB6
A
301 304Right-handed 310
Helix 16
AB7
A
305 319Right-handed alpha
Helix 17
AB8
A
341 350Right-handed alpha
Helix 18
AB9
A
355 369Right-handed alpha
Helix 19
AC1
A
372 384Right-handed alpha
Helix 20
AC2
A
391 403Right-handed alpha
Helix 21
AC3
A
407 419Right-handed alpha
Helix 22
AC4
A
434 441Right-handed alpha
Helix 23
AC5
A
444 451Right-handed alpha
Helix 24
AC6
A
452 455Right-handed 310
Helix 25
AC7
A
458 463Right-handed alpha
Helix 26
AC8
A
464 468Right-handed 310
Helix 27
AC9
A
469 476Right-handed alpha
Helix 28
AD1
A
490 506Right-handed alpha
Helix 29
AD2
B
36 44Right-handed alpha
Helix 30
AD3
B
58 62Right-handed 310
Helix 31
AD4
B
66 86Right-handed alpha
Helix 32
AD5
B
97 109Right-handed alpha
Helix 33
AD6
B
121 138Right-handed alpha
Helix 34
AD7
B
152 160Right-handed alpha
Helix 35
AD8
B
167 177Right-handed alpha
Helix 36
AD9
B
189 196Right-handed alpha
Helix 37
AE1
B
203 209Right-handed alpha
Helix 38
AE2
B
231 248Right-handed alpha
Helix 39
AE3
B
269 275Right-handed alpha
Helix 40
AE4
B
279 295Right-handed alpha
Helix 41
AE5
B
301 304Right-handed 310
Helix 42
AE6
B
305 319Right-handed alpha
Helix 43
AE7
B
341 351Right-handed alpha
Helix 44
AE8
B
355 369Right-handed alpha
Helix 45
AE9
B
372 384Right-handed alpha
Helix 46
AF1
B
391 403Right-handed alpha
Helix 47
AF2
B
407 419Right-handed alpha
Helix 48
AF3
B
434 441Right-handed alpha
Helix 49
AF4
B
444 451Right-handed alpha
Helix 50
AF5
B
452 457Right-handed 310
Helix 51
AF6
B
464 468Right-handed 310
Helix 52
AF7
B
469 476Right-handed alpha
Helix 53
AF8
B
490 506Right-handed alpha
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There are 2 sheets in PDB entry 7EJ9. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 95first strand
Strand 2
A
48 55parallel
Strand 3
A
22 27parallel
Strand 4
A
113 117parallel
Strand 5
A
141 145parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
91 95first strand
Strand 2
B
48 55parallel
Strand 3
B
22 27parallel
Strand 4
B
113 117parallel
Strand 5
B
141 145parallel
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