Analysis of interatomic Contacts of Structural Units in PDB entry:
7EJA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7EJA entry

There are 5 chains in PDB entry 7EJA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 5	TYR 354
B	LEU 7	ASN 340
G	ILE 9	ARG 62
R	TYR 43	CYS 457
H	ASP 1	LYS 236

There are 23 helices in PDB entry 7EJA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	31	Right-handed alpha
Helix 2	AA2	A	45	52	Right-handed alpha
Helix 3	AA3	A	208	214	Right-handed alpha
Helix 4	AA4	A	215	217	Right-handed 310
Helix 5	AA5	A	245	256	Right-handed alpha
Helix 6	AA6	A	272	281	Right-handed alpha
Helix 7	AA7	A	297	307	Right-handed alpha
Helix 8	AA8	A	329	350	Right-handed alpha
Helix 9	AA9	B	8	25	Right-handed alpha
Helix 10	AB1	G	10	24	Right-handed alpha
Helix 11	AB2	G	29	45	Right-handed alpha
Helix 12	AB3	R	47	74	Right-handed alpha
Helix 13	AB4	R	83	108	Right-handed alpha
Helix 14	AB5	R	120	151	Right-handed alpha
Helix 15	AB6	R	152	157	Right-handed alpha
Helix 16	AB7	R	158	160	Right-handed 310
Helix 17	AB8	R	161	181	Right-handed alpha
Helix 18	AB9	R	208	242	Right-handed alpha
Helix 19	AC1	R	376	411	Right-handed alpha
Helix 20	AC2	R	422	443	Right-handed alpha
Helix 21	AC3	R	445	457	Right-handed alpha
Helix 22	AC4	H	28	32	Right-handed 310
Helix 23	AC5	H	87	91	Right-handed 310

There are 12 sheets in PDB entry 7EJA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	186	189	first strand
Strand 2	A	197	201	anti-parallel
Strand 3	A	34	38	parallel
Strand 4	A	221	226	parallel
Strand 5	A	264	269	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	51	first strand
Strand 2	B	336	339	anti-parallel
Strand 3	B	327	330	anti-parallel
Strand 4	B	317	320	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	63	first strand
Strand 2	B	70	74	anti-parallel
Strand 3	B	78	83	anti-parallel
Strand 4	B	88	94	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	102	105	first strand
Strand 2	B	111	115	anti-parallel
Strand 3	B	121	125	anti-parallel
Strand 4	B	134	139	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	151	first strand
Strand 2	B	157	161	anti-parallel
Strand 3	B	165	170	anti-parallel
Strand 4	B	175	181	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	191	192	first strand
Strand 2	B	198	201	anti-parallel
Strand 3	B	208	212	anti-parallel
Strand 4	B	218	222	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	229	234	first strand
Strand 2	B	241	245	anti-parallel
Strand 3	B	250	254	anti-parallel
Strand 4	B	259	264	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	275	277	first strand
Strand 2	B	284	288	anti-parallel
Strand 3	B	296	298	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	6	first strand
Strand 2	H	17	25	anti-parallel
Strand 3	H	78	84	anti-parallel
Strand 4	H	68	73	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	58	60	first strand
Strand 2	H	45	51	anti-parallel
Strand 3	H	33	39	anti-parallel
Strand 4	H	93	99	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	134	136	first strand
Strand 2	H	231	234	parallel
Strand 3	H	214	219	anti-parallel
Strand 4	H	162	167	anti-parallel
Strand 5	H	174	178	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	143	148	first strand
Strand 2	H	199	204	anti-parallel
Strand 3	H	191	195	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7EJA

Analysis of interatomic Contacts of Structural Units in PDB entry:
7EJA