Analysis of interatomic Contacts of Structural Units in PDB entry:
7EJJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7EJJ entry

There are 4 chains in PDB entry 7EJJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3GLN 252
B
 ASP 3GLN 252
C
 ASP 3GLN 252
D
 ASP 3GLN 252
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 7EJJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 30Right-handed alpha
Helix 2
AA2
A
40 52Right-handed alpha
Helix 3
AA3
A
66 82Right-handed alpha
Helix 4
AA4
A
103 115Right-handed alpha
Helix 5
AA5
A
115 130Right-handed alpha
Helix 6
AA6
A
143 147Right-handed 310
Helix 7
AA7
A
153 177Right-handed alpha
Helix 8
AA8
A
193 198Right-handed alpha
Helix 9
AA9
A
201 208Right-handed alpha
Helix 10
AB1
A
219 232Right-handed alpha
Helix 11
AB2
A
233 236Right-handed 310
Helix 12
AB3
A
248 252Right-handed 310
Helix 13
AB4
B
17 30Right-handed alpha
Helix 14
AB5
B
40 52Right-handed alpha
Helix 15
AB6
B
66 82Right-handed alpha
Helix 16
AB7
B
103 115Right-handed alpha
Helix 17
AB8
B
115 130Right-handed alpha
Helix 18
AB9
B
143 147Right-handed 310
Helix 19
AC1
B
153 177Right-handed alpha
Helix 20
AC2
B
193 199Right-handed alpha
Helix 21
AC3
B
201 208Right-handed alpha
Helix 22
AC4
B
219 232Right-handed alpha
Helix 23
AC5
B
233 236Right-handed 310
Helix 24
AC6
B
248 252Right-handed 310
Helix 25
AC7
C
17 30Right-handed alpha
Helix 26
AC8
C
40 52Right-handed alpha
Helix 27
AC9
C
66 82Right-handed alpha
Helix 28
AD1
C
103 115Right-handed alpha
Helix 29
AD2
C
115 130Right-handed alpha
Helix 30
AD3
C
143 147Right-handed 310
Helix 31
AD4
C
153 177Right-handed alpha
Helix 32
AD5
C
193 198Right-handed alpha
Helix 33
AD6
C
201 208Right-handed alpha
Helix 34
AD7
C
219 232Right-handed alpha
Helix 35
AD8
C
233 236Right-handed 310
Helix 36
AD9
C
248 252Right-handed 310
Helix 37
AE1
D
17 30Right-handed alpha
Helix 38
AE2
D
40 52Right-handed alpha
Helix 39
AE3
D
66 82Right-handed alpha
Helix 40
AE4
D
103 115Right-handed alpha
Helix 41
AE5
D
115 130Right-handed alpha
Helix 42
AE6
D
143 147Right-handed 310
Helix 43
AE7
D
153 177Right-handed alpha
Helix 44
AE8
D
193 198Right-handed alpha
Helix 45
AE9
D
201 207Right-handed alpha
Helix 46
AF1
D
219 232Right-handed alpha
Helix 47
AF2
D
233 236Right-handed 310
Helix 48
AF3
D
248 252Right-handed 310
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There are 4 sheets in PDB entry 7EJJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 61first strand
Strand 2
A
33 38parallel
Strand 3
A
9 12parallel
Strand 4
A
86 89parallel
Strand 5
A
136 141parallel
Strand 6
A
181 188parallel
Strand 7
A
242 245parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 61first strand
Strand 2
B
33 38parallel
Strand 3
B
9 12parallel
Strand 4
B
86 89parallel
Strand 5
B
136 141parallel
Strand 6
B
181 188parallel
Strand 7
B
242 245parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
57 61first strand
Strand 2
C
33 38parallel
Strand 3
C
9 12parallel
Strand 4
C
86 89parallel
Strand 5
C
136 141parallel
Strand 6
C
181 188parallel
Strand 7
C
242 245parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
57 61first strand
Strand 2
D
33 38parallel
Strand 3
D
9 12parallel
Strand 4
D
86 89parallel
Strand 5
D
136 141parallel
Strand 6
D
181 188parallel
Strand 7
D
242 245parallel
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