Analysis of interatomic Contacts of Structural Units in PDB entry:
7EJU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7EJU entry

There are 2 chains in PDB entry 7EJU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1TYR 1817
B
 SER 31THR 82
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 71 helices in PDB entry 7EJU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 31Right-handed alpha
Helix 2
AA2
A
34 58Right-handed alpha
Helix 3
AA3
A
68 77Right-handed alpha
Helix 4
AA4
A
112 128Right-handed alpha
Helix 5
AA5
A
155 158Right-handed 310
Helix 6
AA6
A
159 171Right-handed alpha
Helix 7
AA7
A
185 192Right-handed alpha
Helix 8
AA8
A
203 207Right-handed 310
Helix 9
AA9
A
212 220Right-handed alpha
Helix 10
AB1
A
231 250Right-handed alpha
Helix 11
AB2
A
266 271Right-handed alpha
Helix 12
AB3
A
284 289Right-handed alpha
Helix 13
AB4
A
291 299Right-handed alpha
Helix 14
AB5
A
323 339Right-handed alpha
Helix 15
AB6
A
346 367Right-handed alpha
Helix 16
AB7
A
397 403Right-handed alpha
Helix 17
AB8
A
404 409Right-handed alpha
Helix 18
AB9
A
413 422Right-handed alpha
Helix 19
AC1
A
439 450Right-handed alpha
Helix 20
AC2
A
473 477Right-handed 310
Helix 21
AC3
A
478 499Right-handed alpha
Helix 22
AC4
A
573 577Right-handed 310
Helix 23
AC5
A
585 598Right-handed alpha
Helix 24
AC6
A
608 622Right-handed alpha
Helix 25
AC7
A
624 632Right-handed alpha
Helix 26
AC8
A
633 643Right-handed alpha
Helix 27
AC9
A
661 678Right-handed alpha
Helix 28
AD1
A
687 700Right-handed alpha
Helix 29
AD2
A
701 704Right-handed 310
Helix 30
AD3
A
711 719Right-handed alpha
Helix 31
AD4
A
724 731Right-handed alpha
Helix 32
AD5
A
744 759Right-handed alpha
Helix 33
AD6
A
775 788Right-handed alpha
Helix 34
AD7
A
832 854Right-handed alpha
Helix 35
AD8
A
863 873Right-handed alpha
Helix 36
AD9
A
887 894Right-handed alpha
Helix 37
AE1
A
897 918Right-handed alpha
Helix 38
AE2
A
970 974Right-handed 310
Helix 39
AE3
A
983 988Right-handed alpha
Helix 40
AE4
A
1008 1019Right-handed alpha
Helix 41
AE5
A
1022 1034Right-handed alpha
Helix 42
AE6
A
1139 1155Right-handed alpha
Helix 43
AE7
A
1163 1180Right-handed alpha
Helix 44
AE8
A
1190 1195Right-handed alpha
Helix 45
AE9
A
1196 1205Right-handed alpha
Helix 46
AF1
A
1220 1232Right-handed alpha
Helix 47
AF2
A
1238 1245Right-handed alpha
Helix 48
AF3
A
1266 1274Right-handed alpha
Helix 49
AF4
A
1294 1317Right-handed alpha
Helix 50
AF5
A
1350 1365Right-handed alpha
Helix 51
AF6
A
1394 1404Right-handed alpha
Helix 52
AF7
A
1410 1425Right-handed alpha
Helix 53
AF8
A
1431 1447Right-handed alpha
Helix 54
AF9
A
1471 1484Right-handed alpha
Helix 55
AG1
A
1493 1506Right-handed alpha
Helix 56
AG2
A
1514 1519Right-handed alpha
Helix 57
AG3
A
1522 1534Right-handed alpha
Helix 58
AG4
A
1536 1541Right-handed alpha
Helix 59
AG5
A
1579 1589Right-handed alpha
Helix 60
AG6
A
1613 1623Right-handed alpha
Helix 61
AG7
A
1638 1644Right-handed alpha
Helix 62
AG8
A
1652 1656Right-handed 310
Helix 63
AG9
A
1663 1667Right-handed 310
Helix 64
AH1
A
1677 1690Right-handed alpha
Helix 65
AH2
A
1694 1698Right-handed 310
Helix 66
AH3
A
1736 1741Right-handed alpha
Helix 67
AH4
A
1744 1748Right-handed 310
Helix 68
AH5
A
1771 1776Right-handed alpha
Helix 69
AH6
A
1776 1782Right-handed alpha
Helix 70
AH7
A
1787 1792Right-handed alpha
Helix 71
AH8
B
58 69Right-handed alpha
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There are 10 sheets in PDB entry 7EJU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 62first strand
Strand 2
A
90 91anti-parallel
Strand 3
A
97 105anti-parallel
Strand 4
A
136 144parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 260first strand
Strand 2
A
645 647anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
384 386first strand
Strand 2
A
391 394anti-parallel
Strand 3
A
527 528anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
541 543first strand
Strand 2
A
552 557anti-parallel
Strand 3
A
570 572anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
734 735first strand
Strand 2
A
1282 1284anti-parallel
Strand 3
A
1235 1236anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1116 1120first strand
Strand 2
A
1129 1133anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1182 1187first strand
Strand 2
A
1329 1334anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1378 1379first strand
Strand 2
A
1386 1387anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1547 1548first strand
Strand 2
A
1675 1676anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1716 1717first strand
Strand 2
A
1801 1802anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il