Analysis of interatomic Contacts of Structural Units in PDB entry:
7EK3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7EK3 entry

There is 1 chain in PDB entry 7EK3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 78GLY 418
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 7EK3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
82 87Right-handed alpha
Helix 2
AA2
A
88 103Right-handed alpha
Helix 3
AA3
A
110 118Right-handed alpha
Helix 4
AA4
A
121 129Right-handed alpha
Helix 5
AA5
A
130 132Right-handed 310
Helix 6
AA6
A
133 162Right-handed alpha
Helix 7
AA7
A
176 226Right-handed alpha
Helix 8
AA8
A
228 230Right-handed 310
Helix 9
AA9
A
231 254Right-handed alpha
Helix 10
AB1
A
258 263Right-handed alpha
Helix 11
AB2
A
268 277Right-handed alpha
Helix 12
AB3
A
280 296Right-handed alpha
Helix 13
AB4
A
299 308Right-handed alpha
Helix 14
AB5
A
310 326Right-handed alpha
Helix 15
AB6
A
329 346Right-handed alpha
Helix 16
AB7
A
346 356Right-handed alpha
Helix 17
AB8
A
358 380Right-handed alpha
Helix 18
AB9
A
383 387Right-handed 310
Helix 19
AC1
A
388 406Right-handed alpha
Helix 20
AC2
A
406 418Right-handed alpha
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There are no sheets in PDB entry 7EK3
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il