Analysis of interatomic Contacts of Structural Units in PDB entry:
7EOQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7EOQ entry

There are 4 chains in PDB entry 7EOQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 34	TRP 837
B	LYS 25	ARG 844
C	LEU 34	TRP 837
D	LYS 25	ARG 844

There are100 helices in PDB entry 7EOQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	45	56	Right-handed alpha
Helix 2	AA2	A	78	92	Right-handed alpha
Helix 3	AA3	A	107	121	Right-handed alpha
Helix 4	AA4	A	151	166	Right-handed alpha
Helix 5	AA5	A	180	194	Right-handed alpha
Helix 6	AA6	A	214	221	Right-handed alpha
Helix 7	AA7	A	232	247	Right-handed alpha
Helix 8	AA8	A	287	310	Right-handed alpha
Helix 9	AA9	A	458	472	Right-handed alpha
Helix 10	AB1	A	494	502	Right-handed alpha
Helix 11	AB2	A	517	522	Right-handed alpha
Helix 12	AB3	A	560	579	Right-handed alpha
Helix 13	AB4	A	599	612	Right-handed alpha
Helix 14	AB5	A	626	632	Right-handed alpha
Helix 15	AB6	A	633	652	Right-handed alpha
Helix 16	AB7	A	667	672	Right-handed alpha
Helix 17	AB8	A	673	676	Right-handed 310
Helix 18	AB9	A	688	696	Right-handed alpha
Helix 19	AC1	A	698	706	Right-handed alpha
Helix 20	AC2	A	712	723	Right-handed alpha
Helix 21	AC3	A	732	741	Right-handed alpha
Helix 22	AC4	A	771	786	Right-handed alpha
Helix 23	AC5	A	788	795	Right-handed alpha
Helix 24	AC6	A	813	837	Right-handed alpha
Helix 25	AC7	B	35	50	Right-handed alpha
Helix 26	AC8	B	70	82	Right-handed alpha
Helix 27	AC9	B	83	86	Right-handed 310
Helix 28	AD1	B	104	112	Right-handed alpha
Helix 29	AD2	B	144	159	Right-handed alpha
Helix 30	AD3	B	170	185	Right-handed alpha
Helix 31	AD4	B	186	188	Right-handed 310
Helix 32	AD5	B	204	213	Right-handed alpha
Helix 33	AD6	B	224	238	Right-handed alpha
Helix 34	AD7	B	251	260	Right-handed 310
Helix 35	AD8	B	277	299	Right-handed alpha
Helix 36	AD9	B	317	327	Right-handed alpha
Helix 37	AE1	B	458	470	Right-handed alpha
Helix 38	AE2	B	499	507	Right-handed alpha
Helix 39	AE3	B	520	527	Right-handed alpha
Helix 40	AE4	B	560	583	Right-handed alpha
Helix 41	AE5	B	604	615	Right-handed alpha
Helix 42	AE6	B	627	656	Right-handed alpha
Helix 43	AE7	B	669	674	Right-handed alpha
Helix 44	AE8	B	687	696	Right-handed alpha
Helix 45	AE9	B	702	707	Right-handed alpha
Helix 46	AF1	B	713	723	Right-handed alpha
Helix 47	AF2	B	733	743	Right-handed alpha
Helix 48	AF3	B	768	782	Right-handed alpha
Helix 49	AF4	B	783	792	Right-handed alpha
Helix 50	AF5	B	810	843	Right-handed alpha
Helix 51	AF6	C	45	56	Right-handed alpha
Helix 52	AF7	C	78	92	Right-handed alpha
Helix 53	AF8	C	107	121	Right-handed alpha
Helix 54	AF9	C	151	166	Right-handed alpha
Helix 55	AG1	C	180	194	Right-handed alpha
Helix 56	AG2	C	214	221	Right-handed alpha
Helix 57	AG3	C	232	247	Right-handed alpha
Helix 58	AG4	C	287	310	Right-handed alpha
Helix 59	AG5	C	458	472	Right-handed alpha
Helix 60	AG6	C	494	502	Right-handed alpha
Helix 61	AG7	C	517	522	Right-handed alpha
Helix 62	AG8	C	560	579	Right-handed alpha
Helix 63	AG9	C	599	612	Right-handed alpha
Helix 64	AH1	C	626	632	Right-handed alpha
Helix 65	AH2	C	633	652	Right-handed alpha
Helix 66	AH3	C	667	672	Right-handed alpha
Helix 67	AH4	C	673	676	Right-handed 310
Helix 68	AH5	C	688	696	Right-handed alpha
Helix 69	AH6	C	698	706	Right-handed alpha
Helix 70	AH7	C	712	723	Right-handed alpha
Helix 71	AH8	C	732	741	Right-handed alpha
Helix 72	AH9	C	771	786	Right-handed alpha
Helix 73	AI1	C	788	795	Right-handed alpha
Helix 74	AI2	C	813	837	Right-handed alpha
Helix 75	AI3	D	35	50	Right-handed alpha
Helix 76	AI4	D	70	82	Right-handed alpha
Helix 77	AI5	D	83	86	Right-handed 310
Helix 78	AI6	D	104	112	Right-handed alpha
Helix 79	AI7	D	144	159	Right-handed alpha
Helix 80	AI8	D	170	185	Right-handed alpha
Helix 81	AI9	D	186	188	Right-handed 310
Helix 82	AJ1	D	204	213	Right-handed alpha
Helix 83	AJ2	D	224	238	Right-handed alpha
Helix 84	AJ3	D	251	260	Right-handed 310
Helix 85	AJ4	D	277	299	Right-handed alpha
Helix 86	AJ5	D	317	327	Right-handed alpha
Helix 87	AJ6	D	458	470	Right-handed alpha
Helix 88	AJ7	D	499	507	Right-handed alpha
Helix 89	AJ8	D	520	527	Right-handed alpha
Helix 90	AJ9	D	560	583	Right-handed alpha
Helix 91	AK1	D	604	615	Right-handed alpha
Helix 92	AK2	D	627	656	Right-handed alpha
Helix 93	AK3	D	669	674	Right-handed alpha
Helix 94	AK4	D	687	696	Right-handed alpha
Helix 95	AK5	D	702	707	Right-handed alpha
Helix 96	AK6	D	713	723	Right-handed alpha
Helix 97	AK7	D	733	743	Right-handed alpha
Helix 98	AK8	D	768	782	Right-handed alpha
Helix 99	AK9	D	783	792	Right-handed alpha
Helix 100	AL1	D	810	843	Right-handed alpha

There are 32 sheets in PDB entry 7EOQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	72	73	first strand
Strand 2	A	36	40	parallel
Strand 3	A	97	99	parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	172	174	first strand
Strand 2	A	226	230	parallel
Strand 3	A	254	257	parallel
Strand 4	A	277	280	parallel
Strand 5	A	362	366	anti-parallel
Strand 6	A	372	374	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	342	343	first strand
Strand 2	A	346	347	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	405	409	first strand
Strand 2	A	474	478	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	420	421	first strand
Strand 2	A	451	456	anti-parallel
Strand 3	A	434	439	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	530	531	first strand
Strand 2	A	759	760	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	727	731	first strand
Strand 2	A	533	538	anti-parallel
Strand 3	A	747	748	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	61	62	first strand
Strand 2	B	28	33	parallel
Strand 3	B	65	66	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	61	62	first strand
Strand 2	B	28	33	parallel
Strand 3	B	90	92	parallel
Strand 4	B	118	120	parallel
Strand 5	B	138	139	parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	194	197	first strand
Strand 2	B	164	168	parallel
Strand 3	B	218	222	parallel
Strand 4	B	246	249	parallel
Strand 5	B	266	271	parallel
Strand 6	B	351	356	anti-parallel
Strand 7	B	361	367	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	330	333	first strand
Strand 2	B	336	338	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	399	402	first strand
Strand 2	B	475	478	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	409	412	first strand
Strand 2	B	452	457	anti-parallel
Strand 3	B	434	437	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	512	514	first strand
Strand 2	B	760	762	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	535	536	first strand
Strand 2	B	756	757	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	681	682	first strand
Strand 2	B	728	732	parallel
Strand 3	B	538	543	anti-parallel
Strand 4	B	746	749	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	72	73	first strand
Strand 2	C	36	40	parallel
Strand 3	C	97	99	parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	172	174	first strand
Strand 2	C	226	230	parallel
Strand 3	C	254	257	parallel
Strand 4	C	277	280	parallel
Strand 5	C	362	366	anti-parallel
Strand 6	C	372	374	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	342	343	first strand
Strand 2	C	346	347	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	405	409	first strand
Strand 2	C	474	478	parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	420	421	first strand
Strand 2	C	451	456	anti-parallel
Strand 3	C	434	439	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	530	531	first strand
Strand 2	C	759	760	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	727	731	first strand
Strand 2	C	533	538	anti-parallel
Strand 3	C	747	748	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	61	62	first strand
Strand 2	D	28	33	parallel
Strand 3	D	65	66	parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	61	62	first strand
Strand 2	D	28	33	parallel
Strand 3	D	90	92	parallel
Strand 4	D	118	120	parallel
Strand 5	D	138	139	parallel

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There are 7 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	194	197	first strand
Strand 2	D	164	168	parallel
Strand 3	D	218	222	parallel
Strand 4	D	246	249	parallel
Strand 5	D	266	271	parallel
Strand 6	D	351	356	anti-parallel
Strand 7	D	361	367	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	330	333	first strand
Strand 2	D	336	338	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	399	402	first strand
Strand 2	D	475	478	parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	409	412	first strand
Strand 2	D	452	457	anti-parallel
Strand 3	D	434	437	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	512	514	first strand
Strand 2	D	760	762	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	535	536	first strand
Strand 2	D	756	757	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	681	682	first strand
Strand 2	D	728	732	parallel
Strand 3	D	538	543	anti-parallel
Strand 4	D	746	749	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7EOQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7EOQ