Analysis of interatomic Contacts of Structural Units in PDB entry:
7EOW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7EOW entry

There are 2 chains in PDB entry 7EOW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 27ALA 228
B
 GLU 2SER 129
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 7EOW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
53 70Right-handed alpha
Helix 2
AA2
A
100 110Right-handed alpha
Helix 3
AA3
A
120 131Right-handed alpha
Helix 4
AA4
A
154 158Right-handed 310
Helix 5
AA5
A
160 171Right-handed alpha
Helix 6
AA6
A
185 196Right-handed alpha
Helix 7
AA7
A
208 224Right-handed alpha
Helix 8
AA8
B
88 92Right-handed 310
Helix 9
AA9
B
112 114Right-handed 310
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There are 4 sheets in PDB entry 7EOW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 93first strand
Strand 2
A
78 85anti-parallel
Strand 3
A
40 47parallel
Strand 4
A
142 149parallel
Strand 5
A
173 180parallel
Strand 6
A
202 204parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 8first strand
Strand 2
B
19 26anti-parallel
Strand 3
B
79 84anti-parallel
Strand 4
B
69 74anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 13first strand
Strand 2
B
123 127parallel
Strand 3
B
93 100anti-parallel
Strand 4
B
35 40anti-parallel
Strand 5
B
46 52anti-parallel
Strand 6
B
59 60anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 13first strand
Strand 2
B
123 127parallel
Strand 3
B
93 100anti-parallel
Strand 4
B
116 119anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il