Analysis of interatomic Contacts of Structural Units in PDB entry:
7EOX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7EOX entry

There are 2 chains in PDB entry 7EOX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 1	TRP 654
B	ASP 1	TRP 654

There are 42 helices in PDB entry 7EOX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	3	8	Right-handed alpha
Helix 2	AA2	A	15	20	Right-handed alpha
Helix 3	AA3	A	21	24	Right-handed 310
Helix 4	AA4	A	39	43	Right-handed 310
Helix 5	AA5	A	65	69	Right-handed 310
Helix 6	AA6	A	105	116	Right-handed alpha
Helix 7	AA7	A	153	168	Right-handed alpha
Helix 8	AA8	A	184	187	Right-handed 310
Helix 9	AA9	A	188	199	Right-handed alpha
Helix 10	AB1	A	270	274	Right-handed alpha
Helix 11	AB2	A	285	290	Right-handed alpha
Helix 12	AB3	A	302	313	Right-handed alpha
Helix 13	AB4	A	341	355	Right-handed alpha
Helix 14	AB5	A	432	451	Right-handed alpha
Helix 15	AB6	A	455	466	Right-handed alpha
Helix 16	AB7	A	487	492	Right-handed alpha
Helix 17	AB8	A	497	502	Right-handed alpha
Helix 18	AB9	A	511	522	Right-handed alpha
Helix 19	AC1	A	525	534	Right-handed alpha
Helix 20	AC2	A	540	545	Right-handed 310
Helix 21	AC3	A	549	553	Right-handed 310
Helix 22	AC4	B	3	8	Right-handed alpha
Helix 23	AC5	B	15	20	Right-handed alpha
Helix 24	AC6	B	21	24	Right-handed 310
Helix 25	AC7	B	39	43	Right-handed 310
Helix 26	AC8	B	65	69	Right-handed 310
Helix 27	AC9	B	105	116	Right-handed alpha
Helix 28	AD1	B	153	168	Right-handed alpha
Helix 29	AD2	B	184	187	Right-handed 310
Helix 30	AD3	B	188	199	Right-handed alpha
Helix 31	AD4	B	270	274	Right-handed alpha
Helix 32	AD5	B	285	290	Right-handed alpha
Helix 33	AD6	B	302	313	Right-handed alpha
Helix 34	AD7	B	341	355	Right-handed alpha
Helix 35	AD8	B	432	451	Right-handed alpha
Helix 36	AD9	B	455	466	Right-handed alpha
Helix 37	AE1	B	487	492	Right-handed alpha
Helix 38	AE2	B	497	502	Right-handed alpha
Helix 39	AE3	B	511	522	Right-handed alpha
Helix 40	AE4	B	525	534	Right-handed alpha
Helix 41	AE5	B	540	545	Right-handed 310
Helix 42	AE6	B	549	553	Right-handed 310

There are 14 sheets in PDB entry 7EOX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	73	78	first strand
Strand 2	A	140	145	parallel
Strand 3	A	27	32	parallel
Strand 4	A	171	174	parallel
Strand 5	A	203	207	parallel
Strand 6	A	226	231	parallel
Strand 7	A	398	401	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	119	124	first strand
Strand 2	A	127	132	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	248	249	first strand
Strand 2	A	235	243	anti-parallel
Strand 3	A	359	369	anti-parallel
Strand 4	A	265	269	anti-parallel
Strand 5	A	293	297	parallel
Strand 6	A	317	321	parallel
Strand 7	A	337	340	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	377	378	first strand
Strand 2	A	478	479	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	405	408	first strand
Strand 2	A	427	430	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	506	508	first strand
Strand 2	A	568	577	anti-parallel
Strand 3	A	613	622	anti-parallel
Strand 4	A	596	601	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	558	561	first strand
Strand 2	A	645	653	parallel
Strand 3	A	632	640	anti-parallel
Strand 4	A	584	591	anti-parallel
Strand 5	A	604	607	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	73	78	first strand
Strand 2	B	140	145	parallel
Strand 3	B	27	32	parallel
Strand 4	B	171	174	parallel
Strand 5	B	203	207	parallel
Strand 6	B	226	231	parallel
Strand 7	B	398	401	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	119	124	first strand
Strand 2	B	127	132	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	248	249	first strand
Strand 2	B	235	243	anti-parallel
Strand 3	B	359	369	anti-parallel
Strand 4	B	265	269	anti-parallel
Strand 5	B	293	297	parallel
Strand 6	B	317	321	parallel
Strand 7	B	337	340	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	377	378	first strand
Strand 2	B	478	479	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	405	408	first strand
Strand 2	B	427	430	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	506	507	first strand
Strand 2	B	568	577	anti-parallel
Strand 3	B	613	622	anti-parallel
Strand 4	B	596	601	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	558	561	first strand
Strand 2	B	645	653	parallel
Strand 3	B	632	640	anti-parallel
Strand 4	B	585	591	anti-parallel
Strand 5	B	604	606	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7EOX

Analysis of interatomic Contacts of Structural Units in PDB entry:
7EOX