Analysis of interatomic Contacts of Structural Units in PDB entry:
7EP0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7EP0 entry

There are 2 chains in PDB entry 7EP0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 479ARG 728
B
 GLY 479ARG 728
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 7EP0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
482 507Right-handed alpha
Helix 2
AA2
A
511 525Right-handed alpha
Helix 3
AA3
A
528 538Right-handed alpha
Helix 4
AA4
A
539 551Right-handed alpha
Helix 5
AA5
A
554 570Right-handed alpha
Helix 6
AA6
A
571 579Right-handed 310
Helix 7
AA7
A
580 592Right-handed alpha
Helix 8
AA8
A
595 612Right-handed alpha
Helix 9
AA9
A
620 638Right-handed alpha
Helix 10
AB1
A
651 658Right-handed 310
Helix 11
AB2
A
663 681Right-handed alpha
Helix 12
AB3
A
681 692Right-handed alpha
Helix 13
AB4
A
693 703Right-handed alpha
Helix 14
AB5
A
708 726Right-handed alpha
Helix 15
AB6
B
482 488Right-handed alpha
Helix 16
AB7
B
489 507Right-handed alpha
Helix 17
AB8
B
511 526Right-handed alpha
Helix 18
AB9
B
528 537Right-handed alpha
Helix 19
AC1
B
539 551Right-handed alpha
Helix 20
AC2
B
554 570Right-handed alpha
Helix 21
AC3
B
571 579Right-handed 310
Helix 22
AC4
B
580 591Right-handed alpha
Helix 23
AC5
B
595 611Right-handed alpha
Helix 24
AC6
B
612 617Right-handed alpha
Helix 25
AC7
B
620 637Right-handed alpha
Helix 26
AC8
B
665 681Right-handed alpha
Helix 27
AC9
B
681 692Right-handed alpha
Helix 28
AD1
B
693 703Right-handed alpha
Helix 29
AD2
B
708 727Right-handed alpha
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There are no sheets in PDB entry 7EP0
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il